RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 EEF1GP26641 437 aaKnown RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 ITPKBP27987 946 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 ADRA1BP35368 520 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 SERPINH1P50454 418 aaKnown RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 BPIFB4P59827 614 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 TARDBPQ13148 414 aaKnown RBP eCLIP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 COL9A2Q14055 689 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 STAT4Q14765 748 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 SMAD1Q15797 465 aaKnown RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 CA9Q16790 459 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 CLEC16AQ2KHT3 1053 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 HES3Q5TGS1 186 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 KCTD16Q68DU8 428 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 SCYL2Q6P3W7 929 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 WDR59Q6PJI9 974 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 CRTC1Q6UUV9 634 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 LRSAM1Q6UWE0 723 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 LRRC31Q6UY01 552 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 RBM43Q6ZSC3 357 aaKnown RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 TRIM69Q86WT6 500 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 ZDHHC17Q8IUH5 632 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 RYBPQ8N488 228 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 MFSD2AQ8NA29 543 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 TMEM145Q8NBT3 493 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 ARHGEF2Q92974 986 aaKnown RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 LRIG1Q96JA1 1093 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 C1orf74Q96LT6 269 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 NSMCE3Q96MG7 304 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 CDC6Q99741 560 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 C2orf49Q9BVC5 232 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-211ENST00000491581 TMEM63CQ9P1W3 806 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 OR12D3Q9UGF7 316 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 COQ6Q9Y2Z9 468 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 MFHAS1Q9Y4C4 1052 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 NBEAQ8NFP9 2946 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 TRPM6Q9BX84 2022 aa9.08□□□□□ -0.96
HDAC3-211ENST00000491581 ARID1BQ8NFD5 2236 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 CABIN1Q9Y6J0 2220 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 LY6G6EA0A0G2JKS1 128 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 TTC24A2A3L6 582 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 TMEM8BA6NDV4 472 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 IGLON5A6NGN9 336 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 KRIT1O00522 736 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 CREB3O43889 395 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 PIGNO95427 931 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 LSM8O95777 96 aaKnown RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 UGT2B4P06133 528 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 CELA2BP08218 269 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 PLEKP08567 350 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 ADRB3P13945 408 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 DGKAP23743 735 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 RGRP47804 291 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 KRT83P78385 493 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 UBXN1Q04323 297 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 HNRNPDQ14103 355 aaKnown RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 SUZ12Q15022 739 aaKnown RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 TMEM259Q4ZIN3 620 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 CARD16Q5EG05 197 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 C6orf118Q5T5N4 469 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 FAM46CQ5VWP2 391 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 ERN2Q76MJ5 926 aaKnown RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 MON1BQ7L1V2 547 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 SETD3Q86TU7 594 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 HORMAD1Q86X24 394 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 RBFAQ8N0V3 343 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 ARFGAP1Q8N6T3 406 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 TSC1Q92574 1164 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 HMCESQ96FZ2 354 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 KLHDC7BQ96G42 594 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 CELF6Q96J87 481 aaKnown RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 MCEEQ96PE7 176 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 HAPLN3Q96S86 360 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 PEBP4Q96S96 227 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 OSBPL2Q9H1P3 480 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 ADAM22Q9P0K1 906 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 HECAQ9UBI9 543 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 LIMA1Q9UHB6 759 aaKnown RBP9.07□□□□□ -0.96
HDAC3-211ENST00000491581 DACH1Q9UI36 760 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 PCDHB1Q9Y5F3 818 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 FADS3Q9Y5Q0 445 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 U3KQA8 63 aa9.07□□□□□ -0.96
HDAC3-211ENST00000491581 LOC400499M0QZD8 3231 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 ILVBLA1L0T0 632 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 LGALS16A8MUM7 142 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 PRAMEF26H0Y7S4 382 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 J3KR12 359 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 AGRPO00253 132 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 ALOX15BO15296 676 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SLC7A4O43246 635 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 RFPL3O75679 317 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 F9P00740 461 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 KRT3P12035 628 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 TCF4P15884 667 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 GPD1P21695 349 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SDC4P31431 198 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SCNN1AP37088 669 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 STAT1P42224 750 aa9.06□□□□□ -0.96
HDAC3-211ENST00000491581 VASPP50552 380 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 INSM1Q01101 510 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-211ENST00000491581 SFSWAPQ12872 951 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms