RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, human

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFXN4-208	ENST00000490417	PCDHB9	Q9Y5E1	797 aa		13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	CNOT1	A5YKK6	2376 aa	Known RBP	13.87	□□□□□ -0.19
SFXN4-208	ENST00000490417	CEP192	Q8TEP8	1941 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417		A0A1W2PPC4	97 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	TMEM191C	A6NGB0	347 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	KPNA3	O00505	521 aa	Predicted RBP	13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	ADPRH	P54922	357 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	SNRPD1	P62314	119 aa	Known RBP	13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	GRIK2	Q13002	908 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	PIGH	Q14442	188 aa	Predicted RBP	13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	CARD16	Q5EG05	197 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	C22orf39	Q6P5X5	142 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZSCAN30	Q86W11	494 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	NLRP14	Q86W24	1093 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	PRR7	Q8TB68	274 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	ARHGEF2	Q92974	986 aa	Known RBP	13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	HEPH	Q9BQS7	1158 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	DEF6	Q9H4E7	631 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZWILCH	Q9H900	591 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	PREB	Q9HCU5	417 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	MYO1A	Q9UBC5	1043 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	AP4E1	Q9UPM8	1137 aa		13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	MUC22	E2RYF6	1773 aa	Predicted RBP	13.86	□□□□□ -0.19
SFXN4-208	ENST00000490417	WASH4P	A8MWX3	477 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	CFAP99	D6REC4	459 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	EEF2K	O00418	725 aa	Known RBP	13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	PLRG1	O43660	514 aa	Known RBP	13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	BUB1	O43683	1085 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	KDELR3	O43731	214 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	RNGTT	O60942	597 aa	Known RBP	13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	MT-CO1	P00395	513 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	ADRB1	P08588	477 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZNF883	P0CG24	379 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	VAV1	P15498	845 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	CASP14	P31944	242 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	PCK1	P35558	622 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	INAVA	Q3KP66	663 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	SETMAR	Q53H47	684 aa	Predicted RBP	13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	BOLA3	Q53S33	107 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	PSAPL1	Q6NUJ1	521 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	LINGO4	Q6UY18	593 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	RYBP	Q8N488	228 aa	Predicted RBP	13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	AADAT	Q8N5Z0	425 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	OR8K1	Q8NGG5	319 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	OR2A12	Q8NGT7	310 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	ARHGEF26	Q96DR7	871 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	OSBPL1A	Q9BXW6	950 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	XPO4	Q9C0E2	1151 aa	Known RBP	13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	DHX35	Q9H5Z1	703 aa	Known RBP	13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	TM9SF3	Q9HD45	589 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	AASDHPPT	Q9NRN7	309 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZNF212	Q9UDV6	495 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	IP6K2	Q9UHH9	426 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	DMTF1	Q9Y222	760 aa		13.85	□□□□□ -0.19
SFXN4-208	ENST00000490417	DCHS1	Q96JQ0	3298 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	ARHGAP42	A6NI28	874 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	FAM72C	H0Y354	149 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	MYO1F	O00160	1098 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	ZMPSTE24	O75844	475 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	POP4	O95707	220 aa	Known RBP	13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	GSR	P00390	522 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	ARL4A	P40617	200 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	CSNK1E	P49674	416 aa	Known RBP	13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	NDST2	P52849	883 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	OVGP1	Q12889	678 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	SEMA3B	Q13214	749 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	STAT4	Q14765	748 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	GRM3	Q14832	879 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	INO80D	Q53TQ3	878 aa	Predicted RBP	13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	CCDC122	Q5T0U0	273 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	FAM72A	Q5TYM5	149 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	FAM72D	Q6L9T8	149 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	ALKBH5	Q6P6C2	394 aa	Known RBP	13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	FBXL19	Q6PCT2	694 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	DPY19L3	Q6ZPD9	716 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	ERN2	Q76MJ5	926 aa	Known RBP	13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	TRIM69	Q86WT6	500 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	FAM72B	Q86X60	149 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	UMODL1-AS1	Q8N2C9	162 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	LZTR1	Q8N653	840 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	FAM174A	Q8TBP5	190 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	SERAC1	Q96JX3	654 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	HDAC8	Q9BY41	377 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	SLC6A16	Q9GZN6	736 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	GAREM1	Q9H706	876 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	HECA	Q9UBI9	543 aa	Predicted RBP	13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	SERGEF	Q9UGK8	458 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	PCSK1N	Q9UHG2	260 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	ANKRD6	Q9Y2G4	727 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	PCDHGB2	Q9Y5G2	931 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	CACNA1E	Q15878	2313 aa		13.84	□□□□□ -0.19
SFXN4-208	ENST00000490417	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417	MED19	A0JLT2	244 aa	Predicted RBP	13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417		K7ERQ8	282 aa		13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417	VILL	O15195	856 aa		13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417	YKT6	O15498	198 aa		13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417	SMAD6	O43541	496 aa	Known RBP	13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417	LEFTY1	O75610	366 aa		13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417	IGSF6	O95976	241 aa		13.83	□□□□□ -0.2
SFXN4-208	ENST00000490417	S1PR4	O95977	384 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms