RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 MAT2AP31153 395 aaKnown RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 HTR7P34969 479 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 NUDT1P36639 197 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 CCT8P50990 548 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 TAS2R38P59533 333 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 SIM1P81133 766 aaPredicted RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 KCNT1Q5JUK3 1230 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 NAPEPLDQ6IQ20 393 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 LEKR1Q6ZMV7 388 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 ERN2Q76MJ5 926 aaKnown RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 PEBP4Q96S96 227 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 SNRNP25Q9BV90 132 aaKnown RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 DHX35Q9H5Z1 703 aaKnown RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 NOL6Q9H6R4 1146 aaKnown RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 ZDHHC6Q9H6R6 413 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 MRPL47Q9HD33 250 aaKnown RBP20.12■□□□□ 0.81
SMC4-222ENST00000490207 PCSK1NQ9UHG2 260 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 PCDHB9Q9Y5E1 797 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 PCDHGB2Q9Y5G2 931 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 PCNX2A6NKB5 2137 aa20.12■□□□□ 0.81
SMC4-222ENST00000490207 EIF3CLB5ME19 914 aaKnown RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 EEF2KO00418 725 aaKnown RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 RNGTTO60942 597 aaKnown RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 GSRP00390 522 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 ITGB7P26010 798 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 YBEYP58557 167 aaPredicted RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 FAM193AP78312 1265 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 SHC2P98077 582 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 ZNF423Q2M1K9 1284 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 PARP15Q460N3 678 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 SETMARQ53H47 684 aaPredicted RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 SLC45A4Q5BKX6 768 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 RYBPQ8N488 228 aaPredicted RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 ARFGAP1Q8N6T3 406 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 SETD7Q8WTS6 366 aaKnown RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 HMCESQ96FZ2 354 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 CNTNAP3BQ96NU0 1288 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 EIF3CQ99613 913 aaKnown RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 HDAC8Q9BY41 377 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 CNTNAP3Q9BZ76 1288 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 XPO4Q9C0E2 1151 aaKnown RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 ARHGAP20Q9P2F6 1191 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 HECAQ9UBI9 543 aaPredicted RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 DMTF1Q9Y222 760 aa20.11■□□□□ 0.81
SMC4-222ENST00000490207 LUC7L2Q9Y383 392 aaKnown RBP20.11■□□□□ 0.81
SMC4-222ENST00000490207 A0A1W2PR77 199 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 RASA4BC9J798 803 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 H0Y8X5 98 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 WNT9AO14904 365 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 FLRT2O43155 660 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 RASA4O43374 803 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 BUB1O43683 1085 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 PRPSAP2O60256 369 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 TMCC1O94876 653 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 MIPP30301 263 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 NEK3P51956 506 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 SNRPD1P62314 119 aaKnown RBP20.1■□□□□ 0.81
SMC4-222ENST00000490207 CA9Q16790 459 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 ERMARDQ5T6L9 678 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 PLPP6Q8IY26 295 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 OR2AP1Q8NGE2 309 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 OR6K2Q8NGY2 324 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 KCTD15Q96SI1 283 aaPredicted RBP20.1■□□□□ 0.81
SMC4-222ENST00000490207 PCOLCE2Q9UKZ9 415 aa20.1■□□□□ 0.81
SMC4-222ENST00000490207 KCNK3O14649 394 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 LRCH4O75427 683 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 CASP14P31944 242 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 SUZ12Q15022 739 aaKnown RBP20.09■□□□□ 0.81
SMC4-222ENST00000490207 TRIP6Q15654 476 aaKnown RBP20.09■□□□□ 0.81
SMC4-222ENST00000490207 PARS2Q7L3T8 475 aaKnown RBP20.09■□□□□ 0.81
SMC4-222ENST00000490207 UMODL1-AS1Q8N2C9 162 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 CASKIN2Q8WXE0 1202 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 NCAPGQ9BPX3 1015 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 KLC2Q9H0B6 622 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 TSPY26PQ9H489 355 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 DONSONQ9NYP3 566 aa20.09■□□□□ 0.81
SMC4-222ENST00000490207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.09■□□□□ 0.81
SMC4-222ENST00000490207 A0A1W2PQU0 124 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 CBFA2T2O43439 604 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 DFNA5O60443 496 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 PCDH8O95206 1070 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 ADRB3P13945 408 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 GKP32189 559 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 IL9RQ01113 521 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 SERINC3Q13530 473 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 NEK5Q6P3R8 708 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 CYP4V2Q6ZWL3 525 aaPredicted RBP20.08■□□□□ 0.81
SMC4-222ENST00000490207 HORMAD1Q86X24 394 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 LRIG1Q96JA1 1093 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 GDAP1L1Q96MZ0 367 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 THAP2Q9H0W7 228 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 GDF3Q9NR23 364 aa20.08■□□□□ 0.81
SMC4-222ENST00000490207 A0A087X0T9 212 aa20.07■□□□□ 0.8
SMC4-222ENST00000490207 A0A1B0GTQ1 180 aa20.07■□□□□ 0.8
SMC4-222ENST00000490207 PRAMEF26H0Y7S4 382 aa20.07■□□□□ 0.8
SMC4-222ENST00000490207 KRIT1O00522 736 aa20.07■□□□□ 0.8
SMC4-222ENST00000490207 PCDHGA12O60330 932 aa20.07■□□□□ 0.8
SMC4-222ENST00000490207 CBFA2T3O75081 653 aa20.07■□□□□ 0.8
SMC4-222ENST00000490207 IGSF6O95976 241 aa20.07■□□□□ 0.8
SMC4-222ENST00000490207 FAM228BP0C875 321 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms