RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 HSD17B3P37058 310 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 LMAN1P49257 510 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 GEMP55040 296 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 SLC20A2Q08357 652 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 MPP3Q13368 585 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 ZNF235Q14590 738 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 UAP1Q16222 522 aaPredicted RBP14.39□□□□□ -0.11
VPS26A-205ENST00000489656 FNBP1LQ5T0N5 605 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 RETSATQ6NUM9 610 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 LRRC8BQ6P9F7 803 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 MTSS1LQ765P7 747 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 OTOP3Q7RTS5 596 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 CAND1Q86VP6 1230 aaKnown RBP14.39□□□□□ -0.11
VPS26A-205ENST00000489656 CCDC25Q86WR0 208 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 APCDD1Q8J025 514 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 PGBD5Q8N414 524 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 PDCD7Q8N8D1 485 aaKnown RBP14.39□□□□□ -0.11
VPS26A-205ENST00000489656 BHMTQ93088 406 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 LRRC39Q96DD0 335 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 OXNAD1Q96HP4 312 aaPredicted RBP14.39□□□□□ -0.11
VPS26A-205ENST00000489656 PWWP2AQ96N64 755 aa14.39□□□□□ -0.11
VPS26A-205ENST00000489656 INTS6Q9UL03 887 aaKnown RBP14.39□□□□□ -0.11
VPS26A-205ENST00000489656 MYO10Q9HD67 2058 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 GOLGA8MH3BSY2 632 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 AP3B1O00203 1094 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 SNAP91O60641 907 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 PABPC1P11940 636 aaKnown RBP14.38□□□□□ -0.11
VPS26A-205ENST00000489656 TSHRP16473 764 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 CR2P20023 1033 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 CES1P23141 567 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 MAGEA4P43358 317 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 SULT2A1Q06520 285 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 PDIA2Q13087 525 aaKnown RBP14.38□□□□□ -0.11
VPS26A-205ENST00000489656 CYTH1Q15438 398 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 PITRM1Q5JRX3 1037 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 RALGPS1Q5JS13 557 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 ALS2CLQ60I27 953 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 NAPEPLDQ6IQ20 393 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 EP400NLQ6ZTU2 488 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 LINC00523Q86TU6 105 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
VPS26A-205ENST00000489656 IQCKQ8N0W5 287 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 ARRDC2Q8TBH0 407 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 TTC25Q96NG3 672 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 XPO6Q96QU8 1125 aaKnown RBP14.38□□□□□ -0.11
VPS26A-205ENST00000489656 CINPQ9BW66 212 aaPredicted RBP14.38□□□□□ -0.11
VPS26A-205ENST00000489656 EPB41L4BQ9H329 900 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 CDC42EP4Q9H3Q1 356 aaKnown RBP14.38□□□□□ -0.11
VPS26A-205ENST00000489656 SEMA4AQ9H3S1 761 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 SAYSD1Q9NPB0 183 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 CASS4Q9NQ75 786 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 ABCB8Q9NUT2 735 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 GGA2Q9UJY4 613 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
VPS26A-205ENST00000489656 USP15Q9Y4E8 981 aaPredicted RBP14.38□□□□□ -0.11
VPS26A-205ENST00000489656 MUSKO15146 869 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 RIPK2O43353 540 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 SASH3O75995 380 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 TMCC1O94876 653 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 TTC4O95801 387 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 MMP2P08253 660 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 NUDT17P0C025 328 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 ARSAP15289 507 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 PSMC3P17980 439 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 ADRA1AP35348 466 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 TIE1P35590 1138 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 SERPINH1P50454 418 aaKnown RBP14.37□□□□□ -0.11
VPS26A-205ENST00000489656 NSUN2Q08J23 767 aaKnown RBP eCLIP14.37□□□□□ -0.11
VPS26A-205ENST00000489656 NIPAL4Q0D2K0 466 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 SMAD4Q13485 552 aaKnown RBP14.37□□□□□ -0.11
VPS26A-205ENST00000489656 GAB4Q2WGN9 574 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 MSS51Q4VC12 460 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 DNAJC21Q5F1R6 531 aaKnown RBP14.37□□□□□ -0.11
VPS26A-205ENST00000489656 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 TRIM68Q6AZZ1 485 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 KDELC1Q6UW63 502 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 ETFBKMTQ8IXQ9 262 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 AHI1Q8N157 1196 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 WFIKKN2Q8TEU8 576 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 PLA2G2FQ9BZM2 168 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 ECT2Q9H8V3 914 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 HPS4Q9NQG7 708 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 NINJ2Q9NZG7 142 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 HS3ST2Q9Y278 367 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 TTLL3Q9Y4R7 772 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 TEX264Q9Y6I9 313 aa14.37□□□□□ -0.11
VPS26A-205ENST00000489656 TCF20Q9UGU0 1960 aaKnown RBP14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ANHXE9PGG2 379 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 F5H423 210 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-205ENST00000489656 MT-CYBP00156 380 aaPredicted RBP14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ABHD2P08910 425 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 CISD3P0C7P0 127 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 SKOR1P84550 965 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 DSC2Q02487 901 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 NR1H3Q13133 447 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 FUT11Q495W5 492 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 CCDC38Q502W7 563 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 ARMC3Q5W041 872 aa14.36□□□□□ -0.11
VPS26A-205ENST00000489656 PARM1Q6UWI2 310 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms