RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 LMLNQ96KR4 655 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 PSKH2Q96QS6 385 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 MGME1Q9BQP7 344 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 CASS4Q9NQ75 786 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 MUSKO15146 869 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 TSHRP16473 764 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 IGFBP4P22692 258 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 MTHFRP42898 656 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 PLK1P53350 603 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 IFFO1Q0D2I5 559 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 OLIG2Q13516 323 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 COL19A1Q14993 1142 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 EML3Q32P44 896 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 PLEKHG6Q3KR16 790 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 PRPF39Q86UA1 669 aaKnown RBP21.99■■□□□ 1.11
SMC4-221ENST00000489573 IPMKQ8NFU5 416 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 OR52K1Q8NGK4 314 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 ACDQ96AP0 544 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 LRCH3Q96II8 777 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 LRRC4CQ9HCJ2 640 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 VPS45Q9NRW7 570 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 ABCB8Q9NUT2 735 aa21.99■■□□□ 1.11
SMC4-221ENST00000489573 USP12O75317 370 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 CD160O95971 181 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 CPP00450 1065 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 CD86P42081 329 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 GEMIN4P57678 1058 aaKnown RBP21.98■■□□□ 1.11
SMC4-221ENST00000489573 DHCR24Q15392 516 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 CYTH1Q15438 398 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 INO80DQ53TQ3 878 aaPredicted RBP21.98■■□□□ 1.11
SMC4-221ENST00000489573 ALG1LQ6GMV1 187 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 RETSATQ6NUM9 610 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 LINGO4Q6UY18 593 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 PALM2Q8IXS6 379 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 ARRDC2Q8TBH0 407 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 MSLNLQ96KJ4 702 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 SIGLEC10Q96LC7 697 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 MYADMQ96S97 322 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 TBL1YQ9BQ87 522 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 VPS37BQ9H9H4 285 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 ZFP14Q9HCL3 533 aa21.98■■□□□ 1.11
SMC4-221ENST00000489573 AP3B1O00203 1094 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 OPA1O60313 960 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 PMPCBO75439 489 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 TMCC1O94876 653 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 ADH1CP00326 375 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 SHBGP04278 402 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 CYP17A1P05093 508 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 MMP2P08253 660 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 HLA-FP30511 346 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 LTBRP36941 435 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 SESN2P58004 480 aaPredicted RBP21.97■■□□□ 1.11
SMC4-221ENST00000489573 ZNF844Q08AG5 666 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 PITRM1Q5JRX3 1037 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 CEP85LQ5SZL2 805 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 KDELC1Q6UW63 502 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 IGDCC3Q8IVU1 814 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 DNAAF3Q8N9W5 541 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 E2F7Q96AV8 911 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 TADA1Q96BN2 335 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 ASIC4Q96FT7 647 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 SEMA3CQ99985 751 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 FICDQ9BVA6 458 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 FSD1LQ9BXM9 530 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 SLC2A11Q9BYW1 496 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 PIH1D1Q9NWS0 290 aaKnown RBP21.97■■□□□ 1.11
SMC4-221ENST00000489573 THG1LQ9NWX6 298 aaKnown RBP21.97■■□□□ 1.11
SMC4-221ENST00000489573 FAM53CQ9NYF3 392 aa21.97■■□□□ 1.11
SMC4-221ENST00000489573 INTS6Q9UL03 887 aaKnown RBP21.97■■□□□ 1.11
SMC4-221ENST00000489573 PRRC2BQ5JSZ5 2229 aaKnown RBP21.96■■□□□ 1.11
SMC4-221ENST00000489573 A0A087WUV0 522 aaPredicted RBP21.96■■□□□ 1.11
SMC4-221ENST00000489573 SDR42E2A6NKP2 422 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 NFATC1O95644 943 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 MGAT1P26572 445 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 GBP2P32456 591 aaPredicted RBP21.96■■□□□ 1.11
SMC4-221ENST00000489573 GPX6P59796 221 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 CDH17Q12864 832 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 HSP90B2PQ58FF3 399 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 TRIM68Q6AZZ1 485 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 TANGO2Q6ICL3 276 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 CAPN12Q6ZSI9 719 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 MRGPRX2Q96LB1 330 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 EBNA1BP2Q99848 306 aaKnown RBP21.96■■□□□ 1.11
SMC4-221ENST00000489573 APOL2Q9BQE5 337 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 GGA2Q9UJY4 613 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 MAD1L1Q9Y6D9 718 aa21.96■■□□□ 1.11
SMC4-221ENST00000489573 CXorf51AA0A1B0GTR3 108 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 HOXC11O43248 304 aaPredicted RBP21.95■■□□□ 1.11
SMC4-221ENST00000489573 ADH5P11766 374 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 PABPC1P11940 636 aaKnown RBP21.95■■□□□ 1.11
SMC4-221ENST00000489573 PHBP35232 272 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 ADRA1AP35348 466 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 WNT3AP56704 352 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 SKOR1P84550 965 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 ASTLQ6HA08 431 aaPredicted RBP21.95■■□□□ 1.11
SMC4-221ENST00000489573 MICALL1Q8N3F8 863 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 MPP5Q8N3R9 675 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 GOLGA6L1Q8N7Z2 621 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 STAMBPL1Q96FJ0 436 aa21.95■■□□□ 1.11
SMC4-221ENST00000489573 CFAP36Q96G28 342 aa21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms