RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.21■□□□□ 0.99
SND1-214ENST00000489417 NAT16Q8N8M0 369 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 MYLIPQ8WY64 445 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 PSKH2Q96QS6 385 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 XPO6Q96QU8 1125 aaKnown RBP21.21■□□□□ 0.99
SND1-214ENST00000489417 MGME1Q9BQP7 344 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 SEMA4AQ9H3S1 761 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 UBP1Q9NZI7 540 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 TRIOBPQ9H2D6 2365 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 MUSKO15146 869 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 ALOX15BO15296 676 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 ECI2O75521 394 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 SASH3O75995 380 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 TMCC1O94876 653 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 MLNP12872 115 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 GRIA1P42261 906 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 GRM2Q14416 872 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 DMC1Q14565 340 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 FUT11Q495W5 492 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 DNAJC21Q5F1R6 531 aaKnown RBP21.21■□□□□ 0.99
SND1-214ENST00000489417 LRRC8BQ6P9F7 803 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 PARM1Q6UWI2 310 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 MTSS1LQ765P7 747 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 ZBED8Q8IZ13 594 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 ARRDC2Q8TBH0 407 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 PABPC3Q9H361 631 aaKnown RBP21.21■□□□□ 0.99
SND1-214ENST00000489417 VIPAS39Q9H9C1 493 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 HPS4Q9NQG7 708 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 NINJ2Q9NZG7 142 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 EPS15L1Q9UBC2 864 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 FBXO10Q9UK96 956 aa21.21■□□□□ 0.99
SND1-214ENST00000489417 CXorf51AA0A1B0GTR3 108 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 GRXCR2A6NFK2 248 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 BANF1O75531 89 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 MT-CYBP00156 380 aaPredicted RBP21.2■□□□□ 0.98
SND1-214ENST00000489417 PSMC3P17980 439 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 MAGEA3P43357 314 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 MPP3Q13368 585 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 MTM1Q13496 603 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 CFAP58Q5T655 872 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 ALG1LQ6GMV1 187 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 KIAA0907Q7Z7F0 614 aaPredicted RBP21.2■□□□□ 0.98
SND1-214ENST00000489417 PRPF39Q86UA1 669 aaKnown RBP21.2■□□□□ 0.98
SND1-214ENST00000489417 CPA6Q8N4T0 437 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 FGF14Q92915 247 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 C9orf72Q96LT7 481 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 SEMA3CQ99985 751 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 ECT2Q9H8V3 914 aa21.2■□□□□ 0.98
SND1-214ENST00000489417 DOCK8Q8NF50 2099 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 AVILO75366 819 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 MMP2P08253 660 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 CD86P42081 329 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 SERPINH1P50454 418 aaKnown RBP21.19■□□□□ 0.98
SND1-214ENST00000489417 SLC20A2Q08357 652 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 OLIG2Q13516 323 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 FASTKD3Q14CZ7 662 aaKnown RBP21.19■□□□□ 0.98
SND1-214ENST00000489417 CCDC85BQ15834 202 aaPredicted RBP21.19■□□□□ 0.98
SND1-214ENST00000489417 HP1BP3Q5SSJ5 553 aaPredicted RBP21.19■□□□□ 0.98
SND1-214ENST00000489417 NAPEPLDQ6IQ20 393 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 KDELC1Q6UW63 502 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 Q7L0L9 218 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 ANKMY2Q8IV38 441 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 IPMKQ8NFU5 416 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 TADA1Q96BN2 335 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 CDX2Q99626 313 aaPredicted RBP21.19■□□□□ 0.98
SND1-214ENST00000489417 TBL1YQ9BQ87 522 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 EPB41L4BQ9H329 900 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 UBE2ZQ9H832 354 aaPredicted RBP21.19■□□□□ 0.98
SND1-214ENST00000489417 CASS4Q9NQ75 786 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 VPS45Q9NRW7 570 aa21.19■□□□□ 0.98
SND1-214ENST00000489417 CDH23Q9H251 3354 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 RIPK2O43353 540 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 USP12O75317 370 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 PMPCBO75439 489 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 TTC4O95801 387 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 MT-CO1P00395 513 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 CISD3P0C7P0 127 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 KCNA5P22460 613 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 DGKGP49619 791 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 WNT3AP56704 352 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 SKOR1P84550 965 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 NR1H3Q13133 447 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 SMAD4Q13485 552 aaKnown RBP21.18■□□□□ 0.98
SND1-214ENST00000489417 KYNUQ16719 465 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 GAB4Q2WGN9 574 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 ALS2CLQ60I27 953 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 LINC00523Q86TU6 105 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 METTL3Q86U44 580 aaKnown RBP21.18■□□□□ 0.98
SND1-214ENST00000489417 ETFBKMTQ8IXQ9 262 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 AHI1Q8N157 1196 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 OR52K1Q8NGK4 314 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 PYROXD1Q8WU10 500 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 TTC25Q96NG3 672 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 FICDQ9BVA6 458 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 LHX3Q9UBR4 397 aa21.18■□□□□ 0.98
SND1-214ENST00000489417 FCF1Q9Y324 198 aaKnown RBP21.18■□□□□ 0.98
SND1-214ENST00000489417 TTC24A2A3L6 582 aaPredicted RBP21.17■□□□□ 0.98
SND1-214ENST00000489417 TRIM24O15164 1050 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 CR2P20023 1033 aa21.17■□□□□ 0.98
SND1-214ENST00000489417 CES1P23141 567 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms