RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 XRCC6P12956 609 aaKnown RBP eCLIP7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 TSHRP16473 764 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 DNASE1P24855 282 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 PDIA3P30101 505 aaKnown RBP7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 CHKAP35790 457 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 EVCP57679 992 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 CCT2P78371 535 aaKnown RBP7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 ADORA2A-AS1P86434 159 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 MCL1Q07820 350 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 ZNF284Q2VY69 593 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 ANO6Q4KMQ2 910 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 CCDC183Q5T5S1 534 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 MBLAC2Q68D91 279 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 ATL3Q6DD88 541 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 GPT2Q8TD30 523 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 THAP4Q8WY91 577 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 HAS1Q92839 578 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 KLK6Q92876 244 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 IFT74Q96LB3 600 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 SPATA32Q96LK8 384 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 ZNF396Q96N95 335 aaPredicted RBP7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 TMEM134Q9H6X4 195 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 PDE7BQ9NP56 450 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 TMEM30AQ9NV96 361 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 RBM28Q9NW13 759 aaKnown RBP7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 CFAP45Q9UL16 551 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 PLEKHA6Q9Y2H5 1048 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 PCDHGA6Q9Y5G7 932 aa7.7□□□□□ -1.18
EXOSC3-206ENST00000489414 HRNRQ86YZ3 2850 aaPredicted RBP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 POM121BA6NF01 834 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 ARGFXA6NJG6 315 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 CCL21O00585 134 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 GABRDO14764 452 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 KLKB1P03952 638 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 GLB1P16278 677 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 IGFBP2P18065 325 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 MZF1P28698 734 aaPredicted RBP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 PCSK1P29120 753 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 CDC27P30260 824 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 LIFRP42702 1097 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 GLRBP48167 497 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 NASPP49321 788 aaPredicted RBP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 PGFP49763 221 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 CACNA2D1P54289 1103 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 DNM1Q05193 864 aaKnown RBP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 TRA2AQ13595 282 aaKnown RBP eCLIP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 PDE1CQ14123 709 aaPredicted RBP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 SV2CQ496J9 727 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 CERCAMQ5T4B2 595 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 LVRNQ6Q4G3 990 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 LYSMD3Q7Z3D4 306 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 CAMKMTQ7Z624 323 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 SFR1Q86XK3 245 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 FAM129CQ86XR2 697 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 TMEM86AQ8N2M4 240 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 CIARTQ8N365 385 aaPredicted RBP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 NT5C1BQ96P26 610 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 SLX1AQ9BQ83 275 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 NUDT22Q9BRQ3 303 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 ZPBPQ9BS86 351 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 HAPLN2Q9GZV7 340 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 GDPD2Q9HCC8 539 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 ABCB8Q9NUT2 735 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 ARHGAP28Q9P2N2 729 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 MAPK8IP1Q9UQF2 711 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 HS3ST3A1Q9Y663 406 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 TRPM6Q9BX84 2022 aa7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 INTS1Q8N201 2190 aaKnown RBP7.69□□□□□ -1.18
EXOSC3-206ENST00000489414 A0A0U1RQS6 177 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 CCDC196A0A1B0GTZ2 297 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 A0A1W2PQU0 124 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 F5H423 210 aaPredicted RBP7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 ZBTB43O43298 467 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 KATNA1O75449 491 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 STC2O76061 302 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 IL1BP01584 269 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 CYBBP04839 570 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 CYP11B2P19099 503 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 HOXD9P28356 352 aaPredicted RBP7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 TAS2R38P59533 333 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 PSMC1P62191 440 aaKnown RBP7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 B4GALNT1Q00973 533 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 TRIM29Q14134 588 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 CLPPQ16740 277 aaPredicted RBP7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 HGSNATQ68CP4 663 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 CEACAM20Q6UY09 585 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 CUZD1Q86UP6 607 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 PHACTR4Q8IZ21 702 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 NUP93Q8N1F7 819 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 GPR156Q8NFN8 814 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 GRHL3Q8TE85 626 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 FAR1Q8WVX9 515 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 WASF1Q92558 559 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 TRIM44Q96DX7 344 aaPredicted RBP7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 PCED1BQ96HM7 432 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 C8orf76Q96K31 380 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 CTRCQ99895 268 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 C19orf24Q9BVV8 132 aa7.68□□□□□ -1.18
EXOSC3-206ENST00000489414 TSPY26PQ9H489 355 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms