RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 COPB1P53618 953 aaKnown RBP15.38■□□□□ 0.05
UFD1-209ENST00000489406 TBX4P57082 545 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 PFN3P60673 137 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 HMGN5P82970 282 aaKnown RBP15.38■□□□□ 0.05
UFD1-209ENST00000489406 MAP9Q49MG5 647 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 ERN2Q76MJ5 926 aaKnown RBP15.38■□□□□ 0.05
UFD1-209ENST00000489406 SPRED1Q7Z699 444 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 STARD8Q92502 1023 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 INTS2Q9H0H0 1204 aaKnown RBP15.38■□□□□ 0.05
UFD1-209ENST00000489406 ABCC13Q9NSE7 274 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 APPL1Q9UKG1 709 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 ENTPD4Q9Y227 616 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 SLC5A6Q9Y289 635 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 KCTD3Q9Y597 815 aa15.38■□□□□ 0.05
UFD1-209ENST00000489406 ZNF106Q9H2Y7 1883 aaKnown RBP15.37■□□□□ 0.05
UFD1-209ENST00000489406 NIPBLQ6KC79 2804 aaeCLIP15.37■□□□□ 0.05
UFD1-209ENST00000489406 FRMD3A2A2Y4 597 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 LRRIQ3A6PVS8 624 aaPredicted RBP15.37■□□□□ 0.05
UFD1-209ENST00000489406 TGFB1I1O43294 461 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 CD2BP2O95400 341 aaKnown RBP15.37■□□□□ 0.05
UFD1-209ENST00000489406 CHRNA3P32297 505 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 MC1RQ01726 317 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 PPARDQ03181 441 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 SGCGQ13326 291 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 ELOCQ15369 112 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 INPP5JQ15735 1006 aaPredicted RBP15.37■□□□□ 0.05
UFD1-209ENST00000489406 NADK2Q4G0N4 442 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 PRR30Q53SZ7 412 aaPredicted RBP15.37■□□□□ 0.05
UFD1-209ENST00000489406 KIAA1161Q6NSJ0 714 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 LVRNQ6Q4G3 990 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 STXBP4Q6ZWJ1 553 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 FSTL5Q8N475 847 aaPredicted RBP15.37■□□□□ 0.05
UFD1-209ENST00000489406 ART4Q93070 314 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 EPSTI1Q96J88 318 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 FEM1CQ96JP0 617 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 STK17AQ9UEE5 414 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 SLC25A13Q9UJS0 675 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 KCND3Q9UK17 655 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 TLK1Q9UKI8 766 aa15.37■□□□□ 0.05
UFD1-209ENST00000489406 TULP2O00295 520 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 SPTLC2O15270 562 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 GJB2P29033 226 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 NEK4P51957 841 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 AP3M2P53677 418 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 SLC12A1Q13621 1099 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 LGI2Q8N0V4 545 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 RNF34Q969K3 372 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 IPO9Q96P70 1041 aaKnown RBP15.36■□□□□ 0.05
UFD1-209ENST00000489406 LENG8Q96PV6 779 aaPredicted RBP15.36■□□□□ 0.05
UFD1-209ENST00000489406 EFHD1Q9BUP0 239 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 SLC29A3Q9BZD2 475 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 CYP4F12Q9HCS2 524 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 MAP10Q9P2G4 905 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 PILRAQ9UKJ1 303 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 PHTF1Q9UMS5 762 aa15.36■□□□□ 0.05
UFD1-209ENST00000489406 IGLON5A6NGN9 336 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 ABCB7O75027 752 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 ASS1P00966 412 aaKnown RBP15.35■□□□□ 0.05
UFD1-209ENST00000489406 ALPIP09923 528 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 CTSEP14091 401 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 GLB1P16278 677 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 ADIGQ0VDE8 80 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 SP5Q6BEB4 398 aaPredicted RBP15.35■□□□□ 0.05
UFD1-209ENST00000489406 MSANTD2Q6P1R3 559 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 PIM3Q86V86 326 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 NLGN4XQ8N0W4 816 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 MMP21Q8N119 569 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 TMIEQ8NEW7 156 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 GPR156Q8NFN8 814 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 NLGN4YQ8NFZ3 816 aaPredicted RBP15.35■□□□□ 0.05
UFD1-209ENST00000489406 TAF4BQ92750 862 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 DDA1Q9BW61 102 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 HDAC8Q9BY41 377 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 LRRC4Q9HBW1 653 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 SLC39A1Q9NY26 324 aa15.35■□□□□ 0.05
UFD1-209ENST00000489406 FARP1Q9Y4F1 1045 aaPredicted RBP15.35■□□□□ 0.05
UFD1-209ENST00000489406 ANKHD1Q8IWZ3 2542 aaKnown RBP15.35■□□□□ 0.05
UFD1-209ENST00000489406 HGSO14964 777 aaPredicted RBP15.34■□□□□ 0.05
UFD1-209ENST00000489406 RFPL1O75677 317 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 SORBS2O94875 1100 aaKnown RBP15.34■□□□□ 0.05
UFD1-209ENST00000489406 MOCS2O96007 188 aaPredicted RBP15.34■□□□□ 0.05
UFD1-209ENST00000489406 RPN1P04843 607 aaKnown RBP15.34■□□□□ 0.05
UFD1-209ENST00000489406 MAP4P27816 1152 aaKnown RBP15.34■□□□□ 0.05
UFD1-209ENST00000489406 VASPP50552 380 aaPredicted RBP15.34■□□□□ 0.05
UFD1-209ENST00000489406 PLK1P53350 603 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 ANAPC15P60006 121 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 ARHGEF7Q14155 803 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 AMZ1Q400G9 498 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 ARSIQ5FYB1 569 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 CERCAMQ5T4B2 595 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 RRAGBQ5VZM2 374 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 GKN2Q86XP6 184 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 HID1Q8IV36 788 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 SFTPA2Q8IWL1 248 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 SH2D3CQ8N5H7 860 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 CHST14Q8NCH0 376 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 CCDC112Q8NEF3 446 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 GRIN3AQ8TCU5 1115 aa15.34■□□□□ 0.05
UFD1-209ENST00000489406 PARD3BQ8TEW8 1205 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms