RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 CAND2O75155 1236 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 SOCS5O75159 536 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 KRT18P05783 430 aaKnown RBP3.61□□□□□ -1.83
CBWD1-216ENST00000489272 UMODP07911 640 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 CKMT1AP12532 417 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 TCEA1P23193 301 aaKnown RBP3.61□□□□□ -1.83
CBWD1-216ENST00000489272 SKIV2L2P42285 1042 aaKnown RBP3.61□□□□□ -1.83
CBWD1-216ENST00000489272 MXI1P50539 228 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 TTC22Q5TAA0 569 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 KLHL17Q6TDP4 642 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 TMC8Q8IU68 726 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 SLC44A2Q8IWA5 706 aaPredicted RBP3.61□□□□□ -1.83
CBWD1-216ENST00000489272 MUC20Q8N307 709 aaPredicted RBP3.61□□□□□ -1.83
CBWD1-216ENST00000489272 SPEM1Q8N4L4 309 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 ZNF527Q8NB42 609 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 NEXN-AS1Q8NBZ9 246 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 CLPBQ9H078 707 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 ACAD9Q9H845 621 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 OBP2BQ9NPH6 170 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 PRDM8Q9NQV8 689 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 TMLHEQ9NVH6 421 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 HERC5Q9UII4 1024 aaKnown RBP3.61□□□□□ -1.83
CBWD1-216ENST00000489272 DHDHQ9UQ10 334 aa3.61□□□□□ -1.83
CBWD1-216ENST00000489272 LGALS16A8MUM7 142 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 MYL1P05976 194 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 F7P08709 466 aaPredicted RBP3.6□□□□□ -1.83
CBWD1-216ENST00000489272 LYL1P12980 280 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 YWHAQP27348 245 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 DPP6P42658 865 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 RPS6KA3P51812 740 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 AP2B1P63010 937 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 SNTA1Q13424 505 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 MYBPC2Q14324 1141 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 KRTAP24-1Q3LI83 254 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 RETSATQ6NUM9 610 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 DSTYKQ6XUX3 929 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 TRIM74Q86UV6 250 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 TRIM73Q86UV7 250 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 BRSK2Q8IWQ3 736 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 PTGR2Q8N8N7 351 aaPredicted RBP3.6□□□□□ -1.83
CBWD1-216ENST00000489272 SCAIQ8N9R8 606 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 C3orf49Q96BT1 292 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 GEMIN8Q9NWZ8 242 aaKnown RBP3.6□□□□□ -1.83
CBWD1-216ENST00000489272 KLQ9UEF7 1012 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 RCE1Q9Y256 329 aa3.6□□□□□ -1.83
CBWD1-216ENST00000489272 IGLV5-37A0A075B6J1 123 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 A0A096LPK6 155 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 SYT5O00445 386 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 STRNO43815 780 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 IGLV2-11P01706 119 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 TFRCP02786 760 aaKnown RBP3.59□□□□□ -1.83
CBWD1-216ENST00000489272 CHN1P15882 459 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 GPR12P47775 334 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 PEX5P50542 639 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 ACSM2AQ08AH3 577 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 DCTN1Q14203 1278 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 CTTNQ14247 550 aaKnown RBP3.59□□□□□ -1.83
CBWD1-216ENST00000489272 SF3B4Q15427 424 aaKnown RBP eCLIP3.59□□□□□ -1.83
CBWD1-216ENST00000489272 TYW3Q6IPR3 259 aaKnown RBP3.59□□□□□ -1.83
CBWD1-216ENST00000489272 GGT6Q6P531 493 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 SYNE3Q6ZMZ3 975 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 CCDC117Q8IWD4 279 aaPredicted RBP3.59□□□□□ -1.83
CBWD1-216ENST00000489272 RBFAQ8N0V3 343 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 SCAMP5Q8TAC9 235 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 NODALQ96S42 347 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 PKP4Q99569 1192 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 PCGF6Q9BYE7 350 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 ABHD16BQ9H3Z7 469 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 NLRC4Q9NPP4 1024 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 CHST12Q9NRB3 414 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 SLC45A1Q9Y2W3 748 aa3.59□□□□□ -1.83
CBWD1-216ENST00000489272 A0A0U1RQJ8 604 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 A0A1B0GVY2 172 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 DYTNA2CJ06 578 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 BMPR1BO00238 502 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 SKAP2O75563 359 aaPredicted RBP3.58□□□□□ -1.84
CBWD1-216ENST00000489272 CBX6O95503 412 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 MYBPHQ13203 477 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 PFKFB4Q16877 469 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 RUNDC3AQ59EK9 446 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 TBC1D9BQ66K14 1250 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 PGBD2Q6P3X8 592 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 EXOC3L1Q86VI1 746 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 GALNT15Q8N3T1 639 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 FSIP1Q8NA03 581 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 TBC1D22AQ8WUA7 517 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 IL17FQ96PD4 163 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 SPRY4Q9C004 299 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 NPFFR1Q9GZQ6 430 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 PABPC3Q9H361 631 aaKnown RBP3.58□□□□□ -1.84
CBWD1-216ENST00000489272 GAREM1Q9H706 876 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 ARNT2Q9HBZ2 717 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 DONSONQ9NYP3 566 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 GRHL1Q9NZI5 618 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 MALT1Q9UDY8 824 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 FBXO40Q9UH90 709 aa3.58□□□□□ -1.84
CBWD1-216ENST00000489272 A0A087WV62 115 aa3.57□□□□□ -1.84
CBWD1-216ENST00000489272 SAA2-SAA4A0A096LPE2 208 aa3.57□□□□□ -1.84
CBWD1-216ENST00000489272 A0A1B0GVM2 712 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms