RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZWILCHQ9H900 591 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 SARDHQ9UL12 918 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 APOBEC2Q9Y235 224 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
HDAC6-232ENST00000489053 PCDHGB2Q9Y5G2 931 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 SNX11Q9Y5W9 270 aa9.3□□□□□ -0.92
HDAC6-232ENST00000489053 CXorf51AA0A1B0GTR3 108 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 A0A1W2PQU0 124 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 TMEM191CA6NGB0 347 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 GOLGA8CPA6NN73 597 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 RASA4BC9J798 803 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 PRAMEF26H0Y7S4 382 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 H3BRJ5 948 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 DFFAO00273 331 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 DDX3XO00571 662 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC6-232ENST00000489053 VILLO15195 856 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 SLC31A1O15431 190 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 RASA4O43374 803 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 KDELR3O43731 214 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 POP4O95707 220 aaKnown RBP9.29□□□□□ -0.92
HDAC6-232ENST00000489053 GSRP00390 522 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 ITGAVP06756 1048 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 C7P10643 843 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 ITGB7P26010 798 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 DRD3P35462 400 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 ZNF135P52742 658 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-232ENST00000489053 YBEYP58557 167 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-232ENST00000489053 PPP2CBP62714 309 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 PPP2CAP67775 309 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 KRT81Q14533 505 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 CCDC157Q569K6 752 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 PPP1R15BQ5SWA1 713 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 CCDC122Q5T0U0 273 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 MANEALQ5VSG8 457 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 AGBL4Q5VU57 503 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 NEK5Q6P3R8 708 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 LAYNQ6UX15 382 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 PIP4P1Q86T03 277 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 NLRP14Q86W24 1093 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 TRIM69Q86WT6 500 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 HORMAD1Q86X24 394 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 CHST14Q8NCH0 376 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 RNF214Q8ND24 703 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 OR6K2Q8NGY2 324 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 FNIP1Q8TF40 1166 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 NSMCE1Q8WV22 266 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 ISG20Q96AZ6 181 aaKnown RBP9.29□□□□□ -0.92
HDAC6-232ENST00000489053 LRIG1Q96JA1 1093 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 FEM1CQ96JP0 617 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 MYOCQ99972 504 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 HDAC8Q9BY41 377 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 SP110Q9HB58 689 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 GPATCH2LQ9NWQ4 482 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 CTTNBP2NLQ9P2B4 639 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 UBA2Q9UBT2 640 aaPredicted RBP9.29□□□□□ -0.92
HDAC6-232ENST00000489053 IPO11Q9UI26 975 aaKnown RBP9.29□□□□□ -0.92
HDAC6-232ENST00000489053 CAPN11Q9UMQ6 739 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 CKAP5Q14008 2032 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 PLXND1Q9Y4D7 1925 aa9.29□□□□□ -0.92
HDAC6-232ENST00000489053 MYO1FO00160 1098 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 TLR4O00206 839 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 AKR1B10O60218 316 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 TMCC1O94876 653 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 UGT2B4P06133 528 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 ADRB3P13945 408 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 CD59P13987 128 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 PRLRP16471 622 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 MIPP30301 263 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 CASP14P31944 242 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 CTSKP43235 329 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 METAP1P53582 386 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 RPS21P63220 83 aaKnown RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 ARF5P84085 180 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 IL9RQ01113 521 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 OVGP1Q12889 678 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 PIGHQ14442 188 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 ACAP1Q15027 740 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 HADHQ16836 314 aaKnown RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 MYLK3Q32MK0 819 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 ODF2Q5BJF6 829 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 SPECC1LQ69YQ0 1117 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 KIAA1161Q6NSJ0 714 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 GDPD4Q6W3E5 623 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 RFX8Q6ZV50 586 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 PTAR1Q7Z6K3 402 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 ZSCAN30Q86W11 494 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 PSTKQ8IV42 348 aaKnown RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 BBS5Q8N3I7 341 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 OR2AP1Q8NGE2 309 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 CTNNBL1Q8WYA6 563 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 HSPH1Q92598 858 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 KLK6Q92876 244 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 HMCESQ96FZ2 354 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 KLHDC7BQ96G42 594 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 CELF6Q96J87 481 aaKnown RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 ELF4Q99607 663 aaPredicted RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 NUP85Q9BW27 656 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 C1QTNF7Q9BXJ2 289 aa9.28□□□□□ -0.92
HDAC6-232ENST00000489053 XPO4Q9C0E2 1151 aaKnown RBP9.28□□□□□ -0.92
HDAC6-232ENST00000489053 TTYH3Q9C0H2 523 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms