RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 MRGPRX3Q96LB0 322 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 PPP1R2P1Q96PQ5 205 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 GORASP1Q9BQQ3 440 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 CINPQ9BW66 212 aaPredicted RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 TRIM31Q9BZY9 425 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 CEP44Q9C0F1 390 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 SLC25A51Q9H1U9 297 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 DPH5Q9H2P9 285 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 RAB6BQ9NRW1 208 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 ELOVL2Q9NXB9 296 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 LHX3Q9UBR4 397 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 SLC25A13Q9UJS0 675 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 TPX2Q9ULW0 747 aaKnown RBP16.28■□□□□ 0.2
CLDN11-208ENST00000488989 ERVW-1Q9UQF0 538 aa16.28■□□□□ 0.2
CLDN11-208ENST00000488989 ESYT3A0FGR9 886 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 SPECC1L-ADORA2AF8WAN1 911 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 SMAPO00193 183 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 ATP9BO43861 1147 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 KAT7O95251 611 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 ATP5BP06576 529 aaKnown RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 DLDP09622 509 aaKnown RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 TPSB2P20231 275 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 SOX9P48436 509 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 KCNJ11Q14654 390 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 TPSAB1Q15661 275 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 ELF2Q15723 593 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 SLC14A2Q15849 920 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 RALGPS1Q5JS13 557 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 IZUMO3Q5VZ72 239 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 NAIF1Q69YI7 327 aaPredicted RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 HIBCHQ6NVY1 386 aaPredicted RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 ZDHHC24Q6UX98 284 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 HOOK3Q86VS8 718 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 NAT8LQ8N9F0 302 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 TSEN2Q8NCE0 465 aaKnown RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 ARRDC2Q8TBH0 407 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 CPT1BQ92523 772 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 ART4Q93070 314 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 EXOC4Q96A65 974 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 IMP4Q96G21 291 aaKnown RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 MYO19Q96H55 970 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 POLR1EQ9GZS1 481 aaKnown RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 EIF2B3Q9NR50 452 aaKnown RBP16.27■□□□□ 0.2
CLDN11-208ENST00000488989 DUSP12Q9UNI6 340 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 STARD13Q9Y3M8 1113 aa16.27■□□□□ 0.2
CLDN11-208ENST00000488989 SMAD6O43541 496 aaKnown RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 NARSO43776 548 aaKnown RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 ZNF821O75541 412 aaPredicted RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 NEBLO76041 1014 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 APODP05090 189 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 CES1P23141 567 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 MCM3P25205 808 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 ECHS1P30084 290 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 CSNK1DP48730 415 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 CARSP49589 748 aaKnown RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 STK19P49842 368 aaPredicted RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 GALK1P51570 392 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 ITGA8P53708 1063 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 CDK16Q00536 496 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 CAV1Q03135 178 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 KDSRQ06136 332 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 NIPAL4Q0D2K0 466 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 CALCOCO2Q13137 446 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 MORF4L2Q15014 288 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 PTPRNQ16849 979 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 KCTD11Q693B1 232 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 NUDT18Q6ZVK8 323 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 PPIL6Q8IXY8 311 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 PLPP6Q8IY26 295 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 ATP11CQ8NB49 1132 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 ATXN2LQ8WWM7 1075 aaKnown RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 RPL10LQ96L21 214 aaKnown RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 NUDCD1Q96RS6 583 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 P2RY13Q9BPV8 354 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 HINFPQ9BQA5 517 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 PARD6BQ9BYG5 372 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 ZDHHC18Q9NUE0 388 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 SHOC2Q9UQ13 582 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 FCF1Q9Y324 198 aaKnown RBP16.26■□□□□ 0.19
CLDN11-208ENST00000488989 CKAP5Q14008 2032 aa16.26■□□□□ 0.19
CLDN11-208ENST00000488989 ERI2A8K979 691 aaKnown RBP16.25■□□□□ 0.19
CLDN11-208ENST00000488989 K7ERQ8 282 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 PSMD3O43242 534 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 ANXA9O76027 345 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 MMP2P08253 660 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 TNFRSF4P43489 277 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 RGRP47804 291 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 MAXP61244 160 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 VSNL1P62760 191 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 BASP1P80723 227 aaKnown RBP16.25■□□□□ 0.19
CLDN11-208ENST00000488989 CBLBQ13191 982 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 PRPSAP1Q14558 356 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 FAXCQ5TGI0 409 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 C22orf39Q6P5X5 142 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 TXNDC11Q6PKC3 985 aa16.25■□□□□ 0.19
CLDN11-208ENST00000488989 CCNI2Q6ZMN8 369 aaPredicted RBP16.25■□□□□ 0.19
CLDN11-208ENST00000488989 PRPF39Q86UA1 669 aaKnown RBP16.25■□□□□ 0.19
CLDN11-208ENST00000488989 PCDH20Q8N6Y1 951 aaKnown RBP16.25■□□□□ 0.19
CLDN11-208ENST00000488989 MCUQ8NE86 351 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms