RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 TMPRSS4Q9NRS4 437 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 ABCF3Q9NUQ8 709 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 THAP1Q9NVV9 213 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 KCNK4Q9NYG8 393 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 IPO11Q9UI26 975 aaKnown RBP6.74□□□□□ -1.33
HDLBP-243ENST00000488923 CDV3Q9UKY7 258 aaKnown RBP6.74□□□□□ -1.33
HDLBP-243ENST00000488923 MAFFQ9ULX9 164 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 RPL26L1Q9UNX3 145 aaKnown RBP6.74□□□□□ -1.33
HDLBP-243ENST00000488923 SORCS3Q9UPU3 1222 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 ANKRD6Q9Y2G4 727 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 PRG3Q9Y2Y8 225 aaPredicted RBP6.74□□□□□ -1.33
HDLBP-243ENST00000488923 BACE2Q9Y5Z0 518 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 TRIP12Q14669 1992 aaPredicted RBP6.74□□□□□ -1.33
HDLBP-243ENST00000488923 TRIP11Q15643 1979 aa6.74□□□□□ -1.33
HDLBP-243ENST00000488923 TSC2P49815 1807 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MTMR11A4FU01 709 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 DRGXA6NNA5 263 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 FOXO6A8MYZ6 492 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ANKRD65E5RJM6 399 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 I6L893 689 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 DFFAO00273 331 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 TBC1D4O60343 1298 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 CCDC22O60826 627 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 DNAJC6O75061 913 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 EFCAB14O75071 495 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 RASSF9O75901 435 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 UBOX5O94941 541 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 IGLV3-27P01718 113 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 CXCL10P02778 98 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SERPINE1P05121 402 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 FURINP09958 794 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 HAPLN1P10915 354 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MYL4P12829 197 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 HOXB8P17481 243 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLC8A1P32418 973 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 CD68P34810 354 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ETFBP38117 255 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 GRIA1P42261 906 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MAGEA12P43365 314 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ALDH7A1P49419 539 aaKnown RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ARFIP2P53365 341 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 TMPRSS15P98073 1019 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 PPARDQ03181 441 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ZBTB16Q05516 673 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 IL10RBQ08334 325 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ZBTB17Q13105 803 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 STX3Q13277 289 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MTM1Q13496 603 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLC14A2Q15849 920 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 USP41Q3LFD5 358 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MGAT5BQ3V5L5 792 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 TAF1BQ53T94 588 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 FAM133BQ5BKY9 247 aaKnown RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MROH9Q5TGP6 573 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MARC1Q5VT66 337 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 TPGS2Q68CL5 300 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 CGB2Q6NT52 195 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 PKN3Q6P5Z2 889 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 KLHDC10Q6PID8 442 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 KIAA0408Q6ZU52 694 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 KCNMB4Q86W47 210 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 GPR65Q8IYL9 337 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 KIRREL3Q8IZU9 778 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 FITM2Q8N6M3 262 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 PPP4R1Q8TF05 950 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SH3TC2Q8TF17 1288 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 AZIN2Q96A70 460 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ZNF837Q96EG3 531 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 RANBP9Q96S59 729 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 KLF6Q99612 283 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 DDX50Q9BQ39 737 aaKnown RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 TTPALQ9BTX7 342 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLC13A1Q9BZW2 595 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLC39A8Q9C0K1 460 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLC25A51Q9H1U9 297 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 RHOJQ9H4E5 214 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SP110Q9HB58 689 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 NMUR1Q9HB89 426 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ARNT2Q9HBZ2 717 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLC40A1Q9NP59 571 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLCO1B3Q9NPD5 702 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SMYD2Q9NRG4 433 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 KLC4Q9NSK0 619 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 C20orf96Q9NUD7 363 aaPredicted RBP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MRGBPQ9NV56 204 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 PCMTD2Q9NV79 361 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
HDLBP-243ENST00000488923 MARCH2Q9P0N8 246 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 GMIPQ9P107 970 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 SLC17A7Q9P2U7 560 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ZFP69BQ9UJL9 534 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 TLK1Q9UKI8 766 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 NEU3Q9UQ49 428 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 HS3ST4Q9Y661 456 aa6.73□□□□□ -1.33
HDLBP-243ENST00000488923 ZCWPW2A0A1B0GU75 182 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 HEATR9A2RTY3 570 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 WDR91A4D1P6 747 aa6.72□□□□□ -1.33
HDLBP-243ENST00000488923 TRAFD1O14545 582 aaPredicted RBP6.72□□□□□ -1.33
HDLBP-243ENST00000488923 TPP1O14773 563 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms