RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SLC17A6Q9P2U8 582 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 ACTL7AQ9Y615 435 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 PSMD3O43242 534 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 RFPL2O75678 378 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 KRT4P19013 534 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 ETFBP38117 255 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 CCR2P41597 374 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 SMAD1Q15797 465 aaKnown RBP20.54■□□□□ 0.88
NECAB3-213ENST00000488489 C9orf50Q5SZB4 431 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 KDELC2Q7Z4H8 507 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 TMEM135Q86UB9 458 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 PARP9Q8IXQ6 854 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 LRRC34Q8IZ02 419 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 ANKRD42Q8N9B4 389 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 TTC16Q8NEE8 873 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 MRPS31Q92665 395 aaKnown RBP20.54■□□□□ 0.88
NECAB3-213ENST00000488489 TTC17Q96AE7 1141 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 IMP4Q96G21 291 aaKnown RBP20.54■□□□□ 0.88
NECAB3-213ENST00000488489 ATXN3LQ9H3M9 355 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 SAMD15Q9P1V8 674 aa20.54■□□□□ 0.88
NECAB3-213ENST00000488489 POLBP06746 335 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 MMP2P08253 660 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 NPY2RP49146 381 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 GEMP55040 296 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 TNK2Q07912 1038 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 SNCBQ16143 134 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 Q6ZNB5 142 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 LINC00523Q86TU6 105 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 FICDQ9BVA6 458 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 MAGEH1Q9H213 219 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 RETREG1Q9H6L5 497 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 CHRAC1Q9NRG0 131 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 SENP1Q9P0U3 644 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 A0A1B0GVM2 712 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 TCAF2A6NFQ2 919 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 C5orf67F2Z3F1 127 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 GJB3O75712 270 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 CKMP06732 381 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 GSTA1P08263 222 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 MYL4P12829 197 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 GLDCP23378 1020 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 DSC2Q02487 901 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 ITKQ08881 620 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 LBRQ14739 615 aaKnown RBP20.53■□□□□ 0.88
NECAB3-213ENST00000488489 KDELC1Q6UW63 502 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 MFSD3Q96ES6 412 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 SMC6Q96SB8 1091 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 KLF6Q99612 283 aaPredicted RBP20.53■□□□□ 0.88
NECAB3-213ENST00000488489 LBHD1Q9BQE6 289 aaPredicted RBP20.53■□□□□ 0.88
NECAB3-213ENST00000488489 IL22Q9GZX6 179 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 GEMIN8Q9NWZ8 242 aaKnown RBP20.53■□□□□ 0.88
NECAB3-213ENST00000488489 ZNF180Q9UJW8 692 aa20.53■□□□□ 0.88
NECAB3-213ENST00000488489 ZCWPW2A0A1B0GU75 182 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 MUSKO15146 869 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 TYROBPO43914 113 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 PPM1LQ5SGD2 360 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 CXorf57Q6NSI4 855 aaKnown RBP20.52■□□□□ 0.88
NECAB3-213ENST00000488489 RANBP10Q6VN20 620 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 CHST9Q7L1S5 443 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 ELMOD1Q8N336 334 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 SERAC1Q96JX3 654 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 ZNF778Q96MU6 729 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 NSRP1Q9H0G5 558 aaKnown RBP20.52■□□□□ 0.88
NECAB3-213ENST00000488489 MTIF3Q9H2K0 278 aaKnown RBP20.52■□□□□ 0.88
NECAB3-213ENST00000488489 TBC1D30Q9Y2I9 924 aa20.52■□□□□ 0.88
NECAB3-213ENST00000488489 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.51■□□□□ 0.87
NECAB3-213ENST00000488489 IQANK1A0A1B0GTG1 560 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 HMX2A2RU54 273 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 FAM47DPA6NHR8 397 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 GOLGA8RI6L899 631 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 GFRA2O00451 464 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 CD86P42081 329 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 CHRNA4P43681 627 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 WNT3AP56704 352 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 ZNF177Q13360 481 aaPredicted RBP20.51■□□□□ 0.87
NECAB3-213ENST00000488489 PCSK7Q16549 785 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 IL31Q6EBC2 164 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 ARRDC2Q8TBH0 407 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 NSMCE1Q8WV22 266 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 SPON2Q9BUD6 331 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 SLC46A2Q9BY10 475 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 ASAH2Q9NR71 780 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 RWDD3Q9Y3V2 267 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 PRPF4O43172 522 aaKnown RBP eCLIP20.51■□□□□ 0.871e-6■■■□□ 14.9
NECAB3-213ENST00000488489 LATS1O95835 1130 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 ERVK-10P10266 1014 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 RPA3P35244 121 aaPredicted RBP20.51■□□□□ 0.87
NECAB3-213ENST00000488489 SLC7A9P82251 487 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 UBE3AQ05086 875 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 MPP3Q13368 585 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 ANKRD20A4Q4UJ75 823 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 FSCBQ5H9T9 825 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 SPANXN3Q5MJ09 141 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 TMCO4Q5TGY1 634 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 SH2D5Q6ZV89 423 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 MAGEC3Q8TD91 643 aa20.51■□□□□ 0.87
NECAB3-213ENST00000488489 ZNF669Q96BR6 464 aaPredicted RBP20.51■□□□□ 0.87
NECAB3-213ENST00000488489 MYCBPQ99417 103 aaPredicted RBP20.51■□□□□ 0.87
NECAB3-213ENST00000488489 DDX50Q9BQ39 737 aaKnown RBP20.51■□□□□ 0.87
NECAB3-213ENST00000488489 FSD1LQ9BXM9 530 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms