RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 KDM7AQ6ZMT4 941 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 CCNJLQ8IV13 435 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 AGGF1Q8N302 714 aaeCLIP12.94□□□□□ -0.34
NELFE-209ENST00000488426 LEMD2Q8NC56 503 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 NSMCE1Q8WV22 266 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 SIGLEC10Q96LC7 697 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 PRICKLE1Q96MT3 831 aaPredicted RBP12.94□□□□□ -0.34
NELFE-209ENST00000488426 FCRL5Q96RD9 977 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 SLC22A12Q96S37 553 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 CORO1BQ9BR76 489 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 NAT9Q9BTE0 207 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 MAGEH1Q9H213 219 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 ACSS3Q9H6R3 686 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 LRRC40Q9H9A6 602 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 SP110Q9HB58 689 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 GLOD4Q9HC38 313 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 SMPD4Q9NXE4 827 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 RABGEF1Q9UJ41 708 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 AAR2Q9Y312 384 aaKnown RBP12.94□□□□□ -0.34
NELFE-209ENST00000488426 CPQQ9Y646 472 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 ZFP37Q9Y6Q3 630 aaPredicted RBP12.94□□□□□ -0.34
NELFE-209ENST00000488426 NUMBLQ9Y6R0 609 aa12.94□□□□□ -0.34
NELFE-209ENST00000488426 F5H423 210 aaPredicted RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 PI15O43692 258 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 ANXA9O76027 345 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 NEBLO76041 1014 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 PEX11BO96011 259 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 RHOP08100 348 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 POU2F2P09086 479 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 DDX6P26196 483 aaKnown RBP eCLIP12.93□□□□□ -0.34
NELFE-209ENST00000488426 AVPR2P30518 371 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 STX2P32856 288 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 GYS2P54840 703 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 MAGOHP61326 146 aaKnown RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 SKOR1P84550 965 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 MTM1Q13496 603 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 Q6ZNB5 142 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 SETD3Q86TU7 594 aaPredicted RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 UBALD2Q8IYN6 164 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 CFAP52Q8N1V2 620 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 PRSS33Q8NF86 280 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 CYP2S1Q96SQ9 504 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 EBNA1BP2Q99848 306 aaKnown RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 MLPHQ9BV36 600 aaPredicted RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 ATXN3LQ9H3M9 355 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 RBM22Q9NW64 420 aaKnown RBP eCLIP12.93□□□□□ -0.34
NELFE-209ENST00000488426 EURLQ9NYK6 297 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 ZC3H7BQ9UGR2 993 aaKnown RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 LSM7Q9UK45 103 aaKnown RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 ZNF510Q9Y2H8 683 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 COL4A3Q01955 1670 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 SDR42E2A6NKP2 422 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 SOBPA7XYQ1 873 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 ANHXE9PGG2 379 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 TRDMT1O14717 391 aaKnown RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 GREM1O60565 184 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 CKMP06732 381 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 MYL4P12829 197 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 GJA1P17302 382 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 PLA2G5P39877 138 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 GRIA1P42261 906 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 GEMIN4P57678 1058 aaKnown RBP12.93□□□□□ -0.34
NELFE-209ENST00000488426 HTR4Q13639 388 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 MARC1Q5VT66 337 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 NAPEPLDQ6IQ20 393 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 CAPN12Q6ZSI9 719 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 LINC00523Q86TU6 105 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 NPAS3Q8IXF0 933 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 FAM217AQ8IXS0 508 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 TEX26Q8N6G2 289 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 TMEM105Q8N8V8 129 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 MAB21L3Q8N8X9 362 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 FBF1Q8TES7 1133 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 USP33Q8TEY7 942 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 WBP2Q969T9 261 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 ZNF599Q96NL3 588 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 CYTH2Q99418 400 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 PHOX2BQ99453 314 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 CASS4Q9NQ75 786 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 DUSP12Q9UNI6 340 aa12.93□□□□□ -0.34
NELFE-209ENST00000488426 WDR87Q6ZQQ6 2873 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.92□□□□□ -0.34
NELFE-209ENST00000488426 A0A1W2PRU2 124 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 TCRBV9S1A1TA0A576 114 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 ILVBLA1L0T0 632 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 A6NNZ2 444 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 XYLBO75191 536 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 MOSPD3O75425 235 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 HLA-DQB2P05538 268 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 PTPN2P17706 415 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 ETFBP38117 255 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 GEMP55040 296 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 RPS24P62847 133 aaKnown RBP12.92□□□□□ -0.34
NELFE-209ENST00000488426 GNA12Q03113 381 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 NR1H3Q13133 447 aa12.92□□□□□ -0.34
NELFE-209ENST00000488426 ZNF177Q13360 481 aaPredicted RBP12.92□□□□□ -0.34
NELFE-209ENST00000488426 TUBB8Q3ZCM7 444 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms