RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 SBK3P0C264 359 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 MCF2P10911 925 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 VDRP11473 427 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 GRM5P41594 1212 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 CLCN3P51790 818 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 KPNA1P52294 538 aaPredicted RBP14.39□□□□□ -0.11
COL16A1-214ENST00000488128 LIMK2P53671 638 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 IGBP1P78318 339 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 GNA12Q03113 381 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 PMS2P3Q13401 168 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 LSMEM2Q8N112 164 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 SREK1Q8WXA9 508 aaKnown RBP14.39□□□□□ -0.11
COL16A1-214ENST00000488128 DLG3Q92796 817 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 LRCH3Q96II8 777 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 VPS39Q96JC1 886 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 MUC3BQ9H195 1237 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 CXCL16Q9H2A7 254 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 PRDM12Q9H4Q4 367 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 SMOXQ9NWM0 555 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 MORF4L1Q9UBU8 362 aa14.39□□□□□ -0.11
COL16A1-214ENST00000488128 CNOT6Q9ULM6 557 aaKnown RBP14.39□□□□□ -0.11
COL16A1-214ENST00000488128 COL11A1P12107 1806 aaPredicted RBP14.39□□□□□ -0.11
COL16A1-214ENST00000488128 SOWAHBA6NEL2 793 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 PORP16435 677 aaPredicted RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 ZNF182P17025 639 aaPredicted RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 NR4A1P22736 598 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 NUP107P57740 925 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 IFRD2Q12894 506 aaPredicted RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 USP10Q14694 798 aaKnown RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 PLCL1Q15111 1095 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 ADRM1Q16186 407 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 SOWAHAQ2M3V2 549 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 GRTP1Q5TC63 336 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 MPZL3Q6UWV2 235 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 FSTL5Q8N475 847 aaPredicted RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 CNDP1Q96KN2 507 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 CDT1Q9H211 546 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 TBC1D23Q9NUY8 699 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 KLHL8Q9P2G9 620 aaPredicted RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 TLK1Q9UKI8 766 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 V9GYQ6 96 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 ADAM23O75077 832 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 GABRB3P28472 473 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 ADORA2BP29275 332 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 NUMBP49757 651 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 C21orf59P57076 290 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 PFKPQ01813 784 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 PRKCQQ04759 706 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 VGLL4Q14135 290 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 AARS2Q5JTZ9 985 aaKnown RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 SETD3Q86TU7 594 aaPredicted RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 ZBTB8OSQ8IWT0 167 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 FAM149B1Q96BN6 582 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 ASB9Q96DX5 294 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 DRC3Q9H069 523 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 PRDM16Q9HAZ2 1276 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 TNFRSF12AQ9NP84 129 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 XPR1Q9UBH6 696 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 RBMX2Q9Y388 322 aaKnown RBP14.38□□□□□ -0.11
COL16A1-214ENST00000488128 CORINQ9Y5Q5 1042 aa14.38□□□□□ -0.11
COL16A1-214ENST00000488128 RNF103-CHMP3A0A140T963 221 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 FUOMA2VDF0 154 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 B4GAT1O43505 415 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 KCNH1O95259 989 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 YBX1P67809 324 aaKnown RBP14.37□□□□□ -0.11
COL16A1-214ENST00000488128 SLC6A3Q01959 620 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 RHDQ02161 417 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 TRAF2Q12933 501 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 NT5DC4Q86YG4 428 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 SLC41A1Q8IVJ1 513 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 PLEKHA8Q96JA3 519 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 NIFKQ9BYG3 293 aaKnown RBP14.37□□□□□ -0.11
COL16A1-214ENST00000488128 POLR1BQ9H9Y6 1135 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 NRBP2Q9NSY0 501 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 VANGL2Q9ULK5 521 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 CLCN2P51788 898 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 CSE1LP55060 971 aaKnown RBP14.37□□□□□ -0.11
COL16A1-214ENST00000488128 PRPSAP1Q14558 356 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 HSDL1Q3SXM5 330 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 NHSL2Q5HYW2 709 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 LIPMQ5VYY2 423 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 GADL1Q6ZQY3 521 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 LYSMD3Q7Z3D4 306 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 KDELC2Q7Z4H8 507 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 APOBEC3FQ8IUX4 373 aaKnown RBP14.37□□□□□ -0.11
COL16A1-214ENST00000488128 CENPSQ8N2Z9 138 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 ABHD8Q96I13 439 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 COX4I2Q96KJ9 171 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 TBCBQ99426 244 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 IGSF9Q9P2J2 1179 aa14.37□□□□□ -0.11
COL16A1-214ENST00000488128 ZNF638Q14966 1978 aaKnown RBP14.37□□□□□ -0.11
COL16A1-214ENST00000488128 H3BMQ9 156 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 DLX3O60479 287 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 B4GALT4O60513 344 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 ARIH2O95376 493 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 ICAM3P32942 547 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 HALP42357 657 aa14.36□□□□□ -0.11
COL16A1-214ENST00000488128 SLC7A2P52569 658 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms