RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CAMK1DQ8IU85 385 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 MMP21Q8N119 569 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 TCP11L2Q8N4U5 519 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 HORMAD2Q8N7B1 307 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 TSPYL6Q8N831 410 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 ZNF366Q8N895 744 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 TNIP2Q8NFZ5 429 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 RAB40AQ8WXH6 277 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 LPAR1Q92633 364 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 SLC25A28Q96A46 364 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 MSI2Q96DH6 328 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 PHF7Q9BWX1 381 aaPredicted RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 SLC26A6Q9BXS9 759 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 B3GNT4Q9C0J1 378 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 INTS2Q9H0H0 1204 aaKnown RBP4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 FZD3Q9NPG1 666 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 ATP8A2Q9NTI2 1148 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 GRHL1Q9NZI5 618 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 TBC1D14Q9P2M4 693 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 FBXO40Q9UH90 709 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 RB1CC1Q8TDY2 1594 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 TNIKQ9UKE5 1360 aa4.13□□□□□ -1.75
ECHDC1-217ENST00000488087 CUX2O14529 1486 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 IGLV5-39A0A0G2JS06 123 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 DDTLA6NHG4 134 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 A6NLC8 198 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 H3BNX3 289 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 BDNFP23560 247 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 ELF1P32519 619 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 TNFSF8P32971 234 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 GGT5P36269 586 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 ANP32AP39687 249 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 PAFAH1B1P43034 410 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 TUBP50607 506 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 CDH15P55291 814 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 SRSF1Q07955 248 aaKnown RBP eCLIP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 PTGR1Q14914 329 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 MAPRE1Q15691 268 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 RPE65Q16518 533 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 ME3Q16798 604 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 EDRF1Q3B7T1 1238 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 UBAP2Q5T6F2 1119 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 ZNF425Q6IV72 752 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 SERPINA11Q86U17 422 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 MON1AQ86VX9 555 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 CHD1LQ86WJ1 897 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 CPXM2Q8N436 756 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 PPHLN1Q8NEY8 458 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 ST8SIA4Q92187 359 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 ATOH1Q92858 354 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 ELP4Q96EB1 424 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 RNF125Q96EQ8 232 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 HMCESQ96FZ2 354 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 CLSTN3Q9BQT9 956 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 C1QTNF7Q9BXJ2 289 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 TTYH1Q9H313 450 aaPredicted RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 MAP6D1Q9H9H5 199 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 IL1RAPL1Q9NZN1 696 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 LAS1LQ9Y4W2 734 aaKnown RBP4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 SQORQ9Y6N5 450 aa4.12□□□□□ -1.75
ECHDC1-217ENST00000488087 A0A096LPK6 155 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 LY6G6EA0A0G2JKS1 128 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 C17orf113A0A1B0GUU1 675 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 C17orf102A2RUQ5 167 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 H0YGN5 161 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 STMND1H3BQB6 276 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 TNPO2O14787 897 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 TSPAN4O14817 238 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 MDM4O15151 490 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 EPN2O95208 641 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 PSG1P11464 419 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 LIFRP42702 1097 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 NR4A2P43354 598 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 ARSFP54793 590 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 PPATQ06203 517 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 G3BP1Q13283 466 aaKnown RBP eCLIP4.11□□□□□ -1.751e-11■■■□□ 15.6
ECHDC1-217ENST00000488087 CAMK1Q14012 370 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 ASPHD1Q5U4P2 390 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 TBC1D9BQ66K14 1250 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 C1QL2Q7Z5L3 287 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 TMTC2Q8N394 836 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 RASSF8Q8NHQ8 419 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 CEP76Q8TAP6 659 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 GDPD5Q8WTR4 605 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 ZBTB10Q96DT7 871 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 KIF1BPQ96EK5 621 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 RRP36Q96EU6 259 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 APOPT1Q96IL0 206 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 ZNF333Q96JL9 665 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 PAIP1Q9H074 479 aaKnown RBP4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 VEZTQ9HBM0 779 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 BEX4Q9NWD9 120 aaPredicted RBP4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 PEMTQ9UBM1 199 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 CLDN16Q9Y5I7 305 aa4.11□□□□□ -1.75
ECHDC1-217ENST00000488087 ARHGAP10A1A4S6 786 aa4.1□□□□□ -1.75
ECHDC1-217ENST00000488087 GAGE12JA6NER3 117 aa4.1□□□□□ -1.75
ECHDC1-217ENST00000488087 FAM157AC9JC47 383 aa4.1□□□□□ -1.75
ECHDC1-217ENST00000488087 SLC25A17O43808 307 aa4.1□□□□□ -1.75
ECHDC1-217ENST00000488087 IFNA2P01563 188 aa4.1□□□□□ -1.75
ECHDC1-217ENST00000488087 KLKB1P03952 638 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms