RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 HMBOX1Q6NT76 420 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 FAM180BQ6P0A1 224 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 SHC4Q6S5L8 630 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 C17orf99Q6UX52 265 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 B4GALNT4Q76KP1 1039 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 UBE2Q1Q7Z7E8 422 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 PIP4P1Q86T03 277 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 TEX19Q8NA77 164 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 C16orf52Q8NHV5 167 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 BCAS4Q8TDM0 211 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 NCSTNQ92542 709 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CNOT9Q92600 299 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 NPLQ9BXD5 320 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 HEMGNQ9BXL5 484 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 INTS2Q9H0H0 1204 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 PREBQ9HCU5 417 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 THSD1Q9NS62 852 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 TXLNGQ9NUQ3 528 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ALKBH4Q9NXW9 302 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 MSRB1Q9NZV6 116 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 SLC25A10Q9UBX3 287 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 CNOT7Q9UIV1 285 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 AGO2Q9UKV8 859 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 PNMA2Q9UL42 364 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 OSGIN2Q9Y236 505 aa3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.09□□□□□ -1.91
R3HDM1-219ENST00000488035 OR6C68A6NDL8 312 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CD8B2A6NJW9 211 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 B4E171 279 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 ZNF814B7Z6K7 855 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 F8W810 466 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 STRNO43815 780 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CEP104O60308 925 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 HBP1O60381 514 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 ATG13O75143 517 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CNOT3O75175 753 aaKnown RBP3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 USP12O75317 370 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 TULP3O75386 442 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CHRM4P08173 479 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 TSPAN7P41732 249 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 STAT1P42224 750 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CASP6P55212 293 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CDH15P55291 814 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 TMPRSS3P57727 454 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 MTX1Q13505 466 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 TSTQ16762 297 aaKnown RBP3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 PIK3CD-AS1Q5SR53 167 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 GPATCH4Q5T3I0 446 aaKnown RBP3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 C10orf25Q5T742 122 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 FAM69AQ5T7M9 428 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 NUGGCQ68CJ6 796 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 AADACL2Q6P093 401 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 DEF8Q6ZN54 512 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 C9orf47Q6ZRZ4 202 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 MOB3CQ70IA8 216 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 MAATS1Q7Z4T9 603 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 WDR5BQ86VZ2 330 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 GHDCQ8N2G8 530 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 LRRC57Q8N9N7 239 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 KCNG4Q8TDN1 519 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 FAR1Q8WVX9 515 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 COQ8BQ96D53 544 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 FRG2BQ96QU4 278 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CD180Q99467 661 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 IFT27Q9BW83 186 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 ACTR5Q9H9F9 607 aaPredicted RBP3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 ATP8A2Q9NTI2 1148 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 SMC4Q9NTJ3 1288 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 HEY2Q9UBP5 337 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 HSPB7Q9UBY9 170 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 SUFUQ9UMX1 484 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 COG5Q9UP83 839 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 CAMK2AQ9UQM7 478 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 TMEM98Q9Y2Y6 226 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 MST1RQ04912 1400 aa3.08□□□□□ -1.92
R3HDM1-219ENST00000488035 DPPA5A6NC42 116 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 TEX22C9J3V5 150 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 TGFB1I1O43294 461 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 TNFSF14O43557 240 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 TLX3O43711 291 aaPredicted RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 HLA-DQA2P01906 255 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 FGF2P09038 288 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 EPHA8P29322 1005 aaPredicted RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 ELF1P32519 619 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 RGS2P41220 211 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 EFNB1P98172 346 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 DDX10Q13206 875 aaKnown RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 ISM2Q6H9L7 571 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 AAGABQ6PD74 315 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 C1orf122Q6ZSJ8 110 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 KDELC2Q7Z4H8 507 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 R3HCC1LQ7Z5L2 792 aaKnown RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 TBC1D1Q86TI0 1168 aaPredicted RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 CHD1LQ86WJ1 897 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 ANKRD13BQ86YJ7 626 aa3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.07□□□□□ -1.925e-7■■■■□ 20.1
R3HDM1-219ENST00000488035 RBMXL3Q8N7X1 1067 aaKnown RBP3.07□□□□□ -1.92
R3HDM1-219ENST00000488035 TSPYL6Q8N831 410 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms