RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 TMCC1O94876 653 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 HEXIM1O94992 359 aaKnown RBP2.33□□□□□ -2.04
USP9X-208ENST00000487625 CLDN7O95471 211 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 FAM90A15PP0C7V4 464 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 FAM90A14PP0C7W9 464 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 NAGAP17050 411 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 HOXB9P17482 250 aaPredicted RBP2.33□□□□□ -2.04
USP9X-208ENST00000487625 TM4SF4P48230 202 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 RCAN1P53805 252 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 CDH12P55289 794 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 TBX4P57082 545 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 TUBA1BP68363 451 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 TRAF2Q12933 501 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 SAFBQ15424 915 aaKnown RBP eCLIP2.33□□□□□ -2.04
USP9X-208ENST00000487625 ZNF239Q16600 458 aaKnown RBP2.33□□□□□ -2.04
USP9X-208ENST00000487625 SYTL3Q4VX76 610 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 IZUMO3Q5VZ72 239 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 DPP9Q86TI2 863 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 GTSCR1Q86UQ5 136 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 TRIM74Q86UV6 250 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 TRIM73Q86UV7 250 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 FMNL3Q8IVF7 1028 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 TCP11L2Q8N4U5 519 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 OR2C3Q8N628 320 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 SLC35F5Q8WV83 523 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 KIAA1191Q96A73 305 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 NPAS1Q99742 590 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 ZNF700Q9H0M5 742 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 MMP28Q9H239 520 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 TP63Q9H3D4 680 aaPredicted RBP2.33□□□□□ -2.04
USP9X-208ENST00000487625 ZNF696Q9H7X3 374 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 IL36RNQ9UBH0 155 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 CDH22Q9UJ99 828 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 CNTN6Q9UQ52 1028 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 PRRC2AP48634 2157 aaKnown RBP2.33□□□□□ -2.04
USP9X-208ENST00000487625 ZNF318Q5VUA4 2279 aa2.33□□□□□ -2.04
USP9X-208ENST00000487625 AQP12BA6NM10 295 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 HMGB1P1B2RPK0 211 aaPredicted RBP2.32□□□□□ -2.04
USP9X-208ENST00000487625 GRM8O00222 908 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 HSPB6O14558 160 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 KIF1CO43896 1103 aaKnown RBP2.32□□□□□ -2.04
USP9X-208ENST00000487625 AMBPP02760 352 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 MYZAPP0CAP1 466 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 PRKCHP24723 683 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 MYBPC2Q14324 1141 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 LONRF1Q17RB8 773 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 TRIM60Q495X7 471 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 C5orf22Q49AR2 442 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 ZNF569Q5MCW4 686 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 RETSATQ6NUM9 610 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 MTFR2Q6P444 385 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 NRSN1Q8IZ57 195 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 VPS52Q8N1B4 723 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 ENDOVQ8N8Q3 282 aaKnown RBP2.32□□□□□ -2.04
USP9X-208ENST00000487625 OR1N1Q8NGS0 311 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 HMGB4Q8WW32 186 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 PRPF18Q99633 342 aaKnown RBP2.32□□□□□ -2.04
USP9X-208ENST00000487625 SLC25A33Q9BSK2 321 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 GAREM1Q9H706 876 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 CERS4Q9HA82 394 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 SLC22A11Q9NSA0 550 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 AGO1Q9UL18 857 aaKnown RBP2.32□□□□□ -2.04
USP9X-208ENST00000487625 CEP83Q9Y592 693 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 PCDHA10Q9Y5I2 948 aa2.32□□□□□ -2.04
USP9X-208ENST00000487625 SRPRBQ9Y5M8 271 aaKnown RBP2.32□□□□□ -2.04
USP9X-208ENST00000487625 NPIPB13A6NJU9 1138 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 NPIPB5A8MRT5 1133 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 NPIPB4C9JG80 1138 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 SERPINI2O75830 405 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 LARGE1O95461 756 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 AFPP02771 609 aaKnown RBP2.31□□□□□ -2.04
USP9X-208ENST00000487625 LYL1P12980 280 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 TRIM27P14373 513 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 AMD1P17707 334 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 C21orf33P30042 268 aaPredicted RBP2.31□□□□□ -2.04
USP9X-208ENST00000487625 CLCNKBP51801 687 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 CDK18Q07002 472 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 UBE4AQ14139 1066 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 CTTNQ14247 550 aaKnown RBP2.31□□□□□ -2.04
USP9X-208ENST00000487625 RBBP5Q15291 538 aaKnown RBP2.31□□□□□ -2.04
USP9X-208ENST00000487625 C9orf139Q6ZV77 190 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 MON1BQ7L1V2 547 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 TMEM163Q8TC26 289 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 PARD3BQ8TEW8 1205 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 C2CD4CQ8TF44 421 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 HDAC7Q8WUI4 952 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 STYXQ8WUJ0 223 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 FAR1Q8WVX9 515 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 MUL1Q969V5 352 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 ZNF333Q96JL9 665 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 ADGRG7Q96K78 797 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 FRG2BQ96QU4 278 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 GFM1Q96RP9 751 aaKnown RBP2.31□□□□□ -2.04
USP9X-208ENST00000487625 LHPPQ9H008 270 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 PDE11AQ9HCR9 933 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 SEPSECSQ9HD40 501 aaKnown RBP2.31□□□□□ -2.04
USP9X-208ENST00000487625 FNIP2Q9P278 1114 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 SEL1LQ9UBV2 794 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 SLC25A13Q9UJS0 675 aa2.31□□□□□ -2.04
USP9X-208ENST00000487625 RCE1Q9Y256 329 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms