RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 WASF3Q9UPY6 502 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 PCDHB9Q9Y5E1 797 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 PCDHGB2Q9Y5G2 931 aa11.67□□□□□ -0.54
SPEN-205ENST00000487496 BZW2Q9Y6E2 419 aaKnown RBP11.67□□□□□ -0.54
SPEN-205ENST00000487496 A0A1W2PR77 199 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 BUB1O43683 1085 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 CBFA2T3O75081 653 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 TOP3BO95985 862 aaKnown RBP11.66□□□□□ -0.54
SPEN-205ENST00000487496 MYBL1P10243 752 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 NUDT1P36639 197 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 YBEYP58557 167 aaPredicted RBP11.66□□□□□ -0.54
SPEN-205ENST00000487496 ZBED6P86452 979 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 SUZ12Q15022 739 aaKnown RBP11.66□□□□□ -0.54
SPEN-205ENST00000487496 TRIP6Q15654 476 aaKnown RBP11.66□□□□□ -0.54
SPEN-205ENST00000487496 CA9Q16790 459 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 TDRD12Q587J7 1177 aaKnown RBP11.66□□□□□ -0.54
SPEN-205ENST00000487496 PRAMEF14Q5SWL7 426 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 NAPEPLDQ6IQ20 393 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 NEK5Q6P3R8 708 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 ERN2Q76MJ5 926 aaKnown RBP11.66□□□□□ -0.54
SPEN-205ENST00000487496 UMODL1-AS1Q8N2C9 162 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 IQCDQ96DY2 449 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 TRIM11Q96F44 468 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 PEBP4Q96S96 227 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.66□□□□□ -0.54
SPEN-205ENST00000487496 TM6SF2Q9BZW4 377 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 DHX35Q9H5Z1 703 aaKnown RBP11.66□□□□□ -0.54
SPEN-205ENST00000487496 CATSPERBQ9H7T0 1116 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 GPATCH2LQ9NWQ4 482 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 MYO1AQ9UBC5 1043 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 PCSK1NQ9UHG2 260 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 AP4E1Q9UPM8 1137 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 DMTF1Q9Y222 760 aa11.66□□□□□ -0.54
SPEN-205ENST00000487496 ACACBO00763 2458 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 A0A1B0GTQ1 180 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 A0A1W2PQU0 124 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 ZSCAN5CA6NGD5 496 aaPredicted RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 EIF3CLB5ME19 914 aaKnown RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 RASA4BC9J798 803 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 TLR4O00206 839 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 FGF10O15520 208 aaPredicted RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 FLRT2O43155 660 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 RASA4O43374 803 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 PCDHGA12O60330 932 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 DFNA5O60443 496 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 RNGTTO60942 597 aaKnown RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 RNF8O76064 485 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 GSRP00390 522 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 GYPCP04921 128 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 SERPING1P05155 500 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 SPINK2P20155 84 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 ITGB7P26010 798 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 MIPP30301 263 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 GKP32189 559 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 HTR7P34969 479 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 TPI1P60174 286 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 PARP15Q460N3 678 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 SETMARQ53H47 684 aaPredicted RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 SLC45A4Q5BKX6 768 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 ERMARDQ5T6L9 678 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 CYP4V2Q6ZWL3 525 aaPredicted RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 HORMAD1Q86X24 394 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 ZNF354CQ86Y25 554 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 RYBPQ8N488 228 aaPredicted RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 MFSD2AQ8NA29 543 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 OR2AP1Q8NGE2 309 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 OR6K2Q8NGY2 324 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 VOPP1Q96AW1 172 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 HMCESQ96FZ2 354 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 LRIG1Q96JA1 1093 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 ELF4Q99607 663 aaPredicted RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 EIF3CQ99613 913 aaKnown RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 SNRNP25Q9BV90 132 aaKnown RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 KLC2Q9H0B6 622 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 MRPL47Q9HD33 250 aaKnown RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 GDF3Q9NR23 364 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 LUC7L2Q9Y383 392 aaKnown RBP11.65□□□□□ -0.54
SPEN-205ENST00000487496 SCINQ9Y6U3 715 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 CABIN1Q9Y6J0 2220 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 PLXNA2O75051 1894 aa11.65□□□□□ -0.54
SPEN-205ENST00000487496 A0A087X0T9 212 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 PRAMEF26H0Y7S4 382 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 EEF2KO00418 725 aaKnown RBP11.64□□□□□ -0.55
SPEN-205ENST00000487496 SLC31A1O15431 190 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 PRPSAP2O60256 369 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 LRCH4O75427 683 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 PCDH8O95206 1070 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 POP4O95707 220 aaKnown RBP11.64□□□□□ -0.55
SPEN-205ENST00000487496 FAM228BP0C875 321 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 ADRB3P13945 408 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 CCT8P50990 548 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 NEK3P51956 506 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 NXPH1P58417 271 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 SNRPD1P62314 119 aaKnown RBP11.64□□□□□ -0.55
SPEN-205ENST00000487496 IL9RQ01113 521 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 SERINC3Q13530 473 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 STAT4Q14765 748 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 SHBQ15464 509 aa11.64□□□□□ -0.55
SPEN-205ENST00000487496 MYLK3Q32MK0 819 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms