RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 EIF2AQ9BY44 585 aaKnown RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 FZD8Q9H461 694 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 POMKQ9H5K3 350 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 MAP3K20Q9NYL2 800 aaKnown RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 GJD2Q9UKL4 321 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 QSER1Q2KHR3 1735 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 ZCWPW2A0A1B0GU75 182 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 A0A1W2PPW3 197 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 DFFAO00273 331 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 PPP6CO00743 305 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 GIPC1O14908 333 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 STRNO43815 780 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 AHSGP02765 367 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 COL11A2P13942 1736 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 ZNF26P17031 533 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 CD247P20963 164 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 NR1H2P55055 460 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 IKBKEQ14164 716 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 DPYSL2Q16555 572 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 XRRA1Q6P2D8 792 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 SPPL2CQ8IUH8 684 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 SNX29P2Q8IUI4 249 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 LSMEM2Q8N112 164 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 CBR4Q8N4T8 237 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 TMEM102Q8N9M5 508 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 FLAD1Q8NFF5 587 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 RMND5BQ96G75 393 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 FRMD8Q9BZ67 464 aaPredicted RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 OXSMQ9NWU1 459 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 MKS1Q9NXB0 559 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 ALDH1A2O94788 518 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 SLC4A1P02730 911 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 GABRB3P28472 473 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 C1QTNF8P60827 252 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 ZNF789Q5FWF6 425 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 ESRP1Q6NXG1 681 aaKnown RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 METTL7BQ6UX53 244 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 PIGZQ86VD9 579 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 CXorf38Q8TB03 319 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 SREK1Q8WXA9 508 aaKnown RBP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 PIGVQ9NUD9 493 aa12.55□□□□□ -0.4
HSPG2-211ENST00000486901 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
HSPG2-211ENST00000486901 KCNH1O95259 989 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 NCK1P16333 377 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 GHRHRQ02643 423 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 PPP1R8Q12972 351 aaKnown RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 BNIP3Q12983 259 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MAP7D1Q3KQU3 841 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 GRTP1Q5TC63 336 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 SCIMPQ6UWF3 145 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 DCBLD1Q8N8Z6 715 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 RNF34Q969K3 372 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MED10Q9BTT4 135 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 RHOBTB2Q9BYZ6 727 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 LRRC40Q9H9A6 602 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MORF4L1Q9UBU8 362 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 RAP2CQ9Y3L5 183 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 I6L893 689 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MTHFD1P11586 935 aaKnown RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 PTPN3P26045 913 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MAP3K7CLP57077 242 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 KIF19Q2TAC6 998 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 CCDC153Q494R4 210 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 TTC33Q6PID6 262 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 POTEHQ6S545 545 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 RP9Q8TA86 221 aaKnown RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 ACMSDQ8TDX5 336 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 RAB26Q9ULW5 256 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 LOXHD1Q8IVV2 1947 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 LRRC14BA6NHZ5 514 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MDM4O15151 490 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 CNTFP26441 200 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 FASTKQ14296 549 aaKnown RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 ZNF772Q68DY9 489 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 TMEM26Q6ZUK4 368 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MFSD6LQ8IWD5 586 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 PGAM4Q8N0Y7 254 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 TXNDC5Q8NBS9 432 aaKnown RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MLPHQ9BV36 600 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
HSPG2-211ENST00000486901 MGAMO43451 1857 aa12.54□□□□□ -0.4
HSPG2-211ENST00000486901 LRRC37AA6NMS7 1700 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 NR5A2O00482 541 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 SPTLC1O15269 473 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 OTUD3Q5T2D3 398 aaPredicted RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 RBM20Q5T481 1227 aaKnown RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 HMBOX1Q6NT76 420 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 AHI1Q8N157 1196 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 SH3RF2Q8TEC5 729 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 NUDT8Q8WV74 236 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 CNDP1Q96KN2 507 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 NXF3Q9H4D5 531 aaKnown RBP12.53□□□□□ -0.4
HSPG2-211ENST00000486901 ZBTB26Q9HCK0 441 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 LTB4R2Q9NPC1 389 aa12.53□□□□□ -0.4
HSPG2-211ENST00000486901 USP22Q9UPT9 525 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms