RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 EML5Q05BV3 1969 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 THADAQ6YHU6 1953 aa12.74□□□□□ -0.37
PTCD1-205ENST00000485746 ABCA7Q8IZY2 2146 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 USP34Q70CQ2 3546 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 PCDH8O95206 1070 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 POP4O95707 220 aaKnown RBP12.73□□□□□ -0.37
PTCD1-205ENST00000485746 GSRP00390 522 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 CTSLP07711 333 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 TCF4P15884 667 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 IL1R2P27930 398 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 MAT2AP31153 395 aaKnown RBP12.73□□□□□ -0.37
PTCD1-205ENST00000485746 DRD3P35462 400 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 HCAR3P49019 387 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 CCR5P51681 352 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 AFF3P51826 1226 aaKnown RBP12.73□□□□□ -0.37
PTCD1-205ENST00000485746 CDH6P55285 790 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 MESDQ14696 234 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 ASTE1Q2TB18 679 aaPredicted RBP12.73□□□□□ -0.37
PTCD1-205ENST00000485746 MYLK3Q32MK0 819 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 ODF2Q5BJF6 829 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 SLC45A4Q5BKX6 768 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 ATXN7L2Q5T6C5 722 aaPredicted RBP12.73□□□□□ -0.37
PTCD1-205ENST00000485746 FBXL19Q6PCT2 694 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 IL27RAQ6UWB1 636 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 TMCO3Q6UWJ1 677 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 ERN2Q76MJ5 926 aaKnown RBP12.73□□□□□ -0.37
PTCD1-205ENST00000485746 ERMP1Q7Z2K6 904 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 MINDY1Q8N5J2 469 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 LZTR1Q8N653 840 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 PAF1Q8N7H5 531 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 NETO2Q8NC67 525 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 OR6K2Q8NGY2 324 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 TEKT4Q8WW24 435 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 GDAP1L1Q96MZ0 367 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 SLC39A8Q9C0K1 460 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 KLC2Q9H0B6 622 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 TM9SF3Q9HD45 589 aa12.73□□□□□ -0.37
PTCD1-205ENST00000485746 TPX2Q9ULW0 747 aaKnown RBP12.73□□□□□ -0.37
PTCD1-205ENST00000485746 MUC22E2RYF6 1773 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 A0A1B0GVT2 93 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 A0A1W2PPC4 97 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 J3KR12 359 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 NEMP1O14524 444 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 CDX4O14627 284 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 PLRG1O43660 514 aaKnown RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 RNGTTO60942 597 aaKnown RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 ZNF821O75541 412 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 PALMO75781 387 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 PROSCO94903 275 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 CD160O95971 181 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 AMPD1P23109 780 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 GKP32189 559 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 NEK3P51956 506 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 GRIK2Q13002 908 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 SPA17Q15506 151 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 DPYSL2Q16555 572 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 INO80DQ53TQ3 878 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 AGBL4Q5VU57 503 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 CYP4V2Q6ZWL3 525 aaPredicted RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 POLNQ7Z5Q5 900 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 MAP7D3Q8IWC1 876 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 PLPP6Q8IY26 295 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 OR2AP1Q8NGE2 309 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 OR2I1PQ8NGU4 316 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 SLC35G2Q8TBE7 412 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 NSMCE1Q8WV22 266 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 MRFAP1L1Q96HT8 127 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 SERAC1Q96JX3 654 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 CALN1Q9BXU9 219 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 HDAC8Q9BY41 377 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 SLC32A1Q9H598 525 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 LRRC19Q9H756 370 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 LUC7LQ9NQ29 371 aaKnown RBP12.72□□□□□ -0.37
PTCD1-205ENST00000485746 NENFQ9UMX5 172 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 FAM186AA6NE01 2351 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 MYO15AQ9UKN7 3530 aa12.72□□□□□ -0.37
PTCD1-205ENST00000485746 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 PRAMEF11O60813 436 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 CER1O95813 267 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 UGT2B4P06133 528 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 IGHV4-34P06331 123 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 KRT7P08729 469 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 XPAP23025 273 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 SERPINB6P35237 376 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 CYLC1P35663 651 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 MAGEA1P43355 309 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 NOP2P46087 812 aaKnown RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 RACK1P63244 317 aaKnown RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 SLC25A11Q02978 314 aaKnown RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 DPYSQ14117 519 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 STAT4Q14765 748 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 CYTH1Q15438 398 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 SETMARQ53H47 684 aaPredicted RBP12.71□□□□□ -0.37
PTCD1-205ENST00000485746 PPM1JQ5JR12 505 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 CFAP58Q5T655 872 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 GDPD4Q6W3E5 623 aa12.71□□□□□ -0.37
PTCD1-205ENST00000485746 GAS2L3Q86XJ1 694 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms