RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 RAB6CQ9H0N0 254 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 OSBPL2Q9H1P3 480 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 KLHL11Q9NVR0 708 aa17.48■□□□□ 0.39
SMC4-216ENST00000485645 FCF1Q9Y324 198 aaKnown RBP17.48■□□□□ 0.39
SMC4-216ENST00000485645 CXorf51AA0A1B0GTR3 108 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 C2CD4BA6NLJ0 364 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 EPHB6O15197 1021 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 ADRB3P13945 408 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 RHOQP17081 205 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 ITGB7P26010 798 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 L1CAMP32004 1257 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 ACVRL1P37023 503 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 PTPN9P43378 593 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 MAPKAPK2P49137 400 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 CCNHP51946 323 aaPredicted RBP17.47■□□□□ 0.39
SMC4-216ENST00000485645 CLDN2P57739 230 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 TMEM259Q4ZIN3 620 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 HES3Q5TGS1 186 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 MANEALQ5VSG8 457 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 KIAA1161Q6NSJ0 714 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 STRADAQ7RTN6 431 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 SLC25A45Q8N413 288 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 FAM174AQ8TBP5 190 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 GPT2Q8TD30 523 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 ISG20Q96AZ6 181 aaKnown RBP17.47■□□□□ 0.39
SMC4-216ENST00000485645 NXPE2Q96DL1 559 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 FEM1CQ96JP0 617 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 PCMTD1Q96MG8 357 aaPredicted RBP17.47■□□□□ 0.39
SMC4-216ENST00000485645 SLC17A9Q9BYT1 436 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 SCUBE2Q9NQ36 999 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 NDFIP2Q9NV92 336 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 FANCLQ9NW38 375 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 TMEM248Q9NWD8 314 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 HECAQ9UBI9 543 aaPredicted RBP17.47■□□□□ 0.39
SMC4-216ENST00000485645 DNAI1Q9UI46 699 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 ACTL7AQ9Y615 435 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 HS3ST3A1Q9Y663 406 aa17.47■□□□□ 0.39
SMC4-216ENST00000485645 TDRD6O60522 2096 aaKnown RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 TRIM38O00635 465 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 SIGLEC6O43699 453 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 GJB6O95452 261 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 KRT3P12035 628 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 UNGP13051 313 aaPredicted RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 HOXB3P14651 431 aaPredicted RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 DGKAP23743 735 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 ACP1P24666 158 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 NSFP46459 744 aaKnown RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 COPB1P53618 953 aaKnown RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 GEMIN4P57678 1058 aaKnown RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 RPS21P63220 83 aaKnown RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 TARDBPQ13148 414 aaKnown RBP eCLIP17.46■□□□□ 0.39
SMC4-216ENST00000485645 ZNF211Q13398 564 aaPredicted RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 PROX2Q3B8N5 592 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 GCNT7Q6ZNI0 430 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 ABI3BPQ7Z7G0 1075 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 PDZD3Q86UT5 571 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 NLRP14Q86W24 1093 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 PLPP6Q8IY26 295 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 RYBPQ8N488 228 aaPredicted RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 ANKRD20A12PQ8NF67 263 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 FAM172AQ8WUF8 416 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 CENPIQ92674 756 aaPredicted RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 ARHGEF2Q92974 986 aaKnown RBP17.46■□□□□ 0.39
SMC4-216ENST00000485645 TBC1D31Q96DN5 1066 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 GBP4Q96PP9 640 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 TM6SF2Q9BZW4 377 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 MAGEH1Q9H213 219 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 ZDHHC6Q9H6R6 413 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 ADAM22Q9P0K1 906 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 HPCAL4Q9UM19 191 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 SIK3Q9Y2K2 1263 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 FADS3Q9Y5Q0 445 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 NBEAQ8NFP9 2946 aa17.46■□□□□ 0.39
SMC4-216ENST00000485645 ATRXP46100 2492 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 ITPR1Q14643 2758 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 A6NNZ2 444 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 FAM72CH0Y354 149 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 AP1G1O43747 822 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 LRIG2O94898 1065 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 CD160O95971 181 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 PAK4O96013 591 aaPredicted RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 CALB1P05937 261 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 PLEKP08567 350 aaPredicted RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 HDAC4P56524 1084 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 GSCP56915 257 aaPredicted RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 DAB2P98082 770 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 PTP4A2Q12974 167 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 POLD3Q15054 466 aaPredicted RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 SYCP1Q15431 976 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 FAM72AQ5TYM5 149 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 FAM72DQ6L9T8 149 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 RBM43Q6ZSC3 357 aaKnown RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 Q6ZSR6 202 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 PARS2Q7L3T8 475 aaKnown RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 PTAR1Q7Z6K3 402 aaPredicted RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 ZSCAN30Q86W11 494 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 FAM72BQ86X60 149 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 DCP2Q8IU60 420 aaKnown RBP17.45■□□□□ 0.38
SMC4-216ENST00000485645 CCDC185Q8N715 623 aa17.45■□□□□ 0.38
SMC4-216ENST00000485645 NEK11Q8NG66 645 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms