RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 PIP5KL1Q5T9C9 394 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 ALKBH5Q6P6C2 394 aaKnown RBP12.51□□□□□ -0.41
MSH5-216ENST00000484309 VSTM4Q8IW00 320 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 TMIEQ8NEW7 156 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 FNIP1Q8TF40 1166 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 KLK6Q92876 244 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 FAM131CQ96AQ9 280 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 MYOCQ99972 504 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 NUP85Q9BW27 656 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 CEP44Q9C0F1 390 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 RETREG1Q9H6L5 497 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 ZWILCHQ9H900 591 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 DYRK4Q9NR20 520 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 AASDHPPTQ9NRN7 309 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 DNAAF2Q9NVR5 837 aaKnown RBP12.51□□□□□ -0.41
MSH5-216ENST00000484309 HECAQ9UBI9 543 aaPredicted RBP12.51□□□□□ -0.41
MSH5-216ENST00000484309 ANAPC7Q9UJX3 599 aa12.51□□□□□ -0.41
MSH5-216ENST00000484309 FNDC3AQ9Y2H6 1198 aaKnown RBP12.51□□□□□ -0.41
MSH5-216ENST00000484309 SPAARA0A1B0GVQ0 90 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 WASH4PA8MWX3 477 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 FGF10O15520 208 aaPredicted RBP12.5□□□□□ -0.41
MSH5-216ENST00000484309 SLC7A4O43246 635 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 DAPK3O43293 454 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 RNGTTO60942 597 aaKnown RBP12.5□□□□□ -0.41
MSH5-216ENST00000484309 TMCC1O94876 653 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 CER1O95813 267 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 WNT1P04628 370 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 CD59P13987 128 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
MSH5-216ENST00000484309 IL1R2P27930 398 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 GRIA4P48058 902 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 CCR5P51681 352 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 SLC20A2Q08357 652 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 TXNRD3NBQ6F5E7 133 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 RFX8Q6ZV50 586 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 CPNE8Q86YQ8 564 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 HSPH1Q92598 858 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 SERAC1Q96JX3 654 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 EXOC2Q96KP1 924 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 CAMK1GQ96NX5 476 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 HEPHQ9BQS7 1158 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 PACSIN1Q9BY11 444 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 ZDHHC5Q9C0B5 715 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 CA5BQ9Y2D0 317 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 ANKRD6Q9Y2G4 727 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 MFHAS1Q9Y4C4 1052 aa12.5□□□□□ -0.41
MSH5-216ENST00000484309 C10orf142B7Z368 130 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 KRIT1O00522 736 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 SH3BP5O60239 455 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 CYP1A2P05177 515 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 PRLRP16471 622 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 ERCC2P18074 760 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 GJC1P36383 396 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 SSR1P43307 286 aaKnown RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 C21orf59P57076 290 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 GEMIN4P57678 1058 aaKnown RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 YBEYP58557 167 aaPredicted RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 RHOAP61586 193 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 RACK1P63244 317 aaKnown RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 FAM193AP78312 1265 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 IL9RQ01113 521 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 SERINC3Q13530 473 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 TRIM14Q14142 442 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 PRAMEF14Q5SWL7 426 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 ERN2Q76MJ5 926 aaKnown RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 PARS2Q7L3T8 475 aaKnown RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 PIP4P1Q86T03 277 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 PRPF39Q86UA1 669 aaKnown RBP12.49□□□□□ -0.41
MSH5-216ENST00000484309 UMODL1-AS1Q8N2C9 162 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 NPWQ8N729 165 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 OR2AP1Q8NGE2 309 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 PPP1R16AQ96I34 528 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 SLC39A8Q9C0K1 460 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 DEF6Q9H4E7 631 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 SLC32A1Q9H598 525 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 OSGEPQ9NPF4 335 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 TM7SF3Q9NS93 570 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 NENFQ9UMX5 172 aa12.49□□□□□ -0.41
MSH5-216ENST00000484309 A0A1W2PQU0 124 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 ZSCAN5CA6NGD5 496 aaPredicted RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 H0Y8X5 98 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 J3KR12 359 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 DFFAO00273 331 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 LATO43561 262 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 MFAP3LO75121 409 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 PCDH8O95206 1070 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 GSRP00390 522 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 UGT2B4P06133 528 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 TPM1P09493 284 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 CEACAM1P13688 526 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 ITGB7P26010 798 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 CD38P28907 300 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 HNRNPH3P31942 346 aaKnown RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 PCK1P35558 622 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 CTSKP43235 329 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 PAPOLAP51003 745 aaKnown RBP12.48□□□□□ -0.41
MSH5-216ENST00000484309 NEK3P51956 506 aa12.48□□□□□ -0.41
MSH5-216ENST00000484309 SNRPD1P62314 119 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms