RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 GCNT7Q6ZNI0 430 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 ARCQ7LC44 396 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 NETO2Q8NC67 525 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 BMFQ96LC9 184 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 HDAC8Q9BY41 377 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 PPARGC1AQ9UBK2 798 aaKnown RBP18.38■□□□□ 0.53
ATG4B-221ENST00000483778 OR12D3Q9UGF7 316 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 NEU3Q9UQ49 428 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 PAXBP1Q9Y5B6 917 aa18.38■□□□□ 0.53
ATG4B-221ENST00000483778 RP1P56715 2156 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 POM121BA6NF01 834 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 YKT6O15498 198 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 CKMT2P17540 419 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 DGKAP23743 735 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 CLCN6P51797 869 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 OVGP1Q12889 678 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 TMEM259Q4ZIN3 620 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 CARD16Q5EG05 197 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 HES3Q5TGS1 186 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 NEK5Q6P3R8 708 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 PDZD3Q86UT5 571 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 NLRP14Q86W24 1093 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 SLC22A18ASQ8N1D0 253 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 CCDC185Q8N715 623 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 OR6K2Q8NGY2 324 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 CENPIQ92674 756 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-221ENST00000483778 TM6SF2Q9BZW4 377 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 DNAI1Q9UI46 699 aa18.37■□□□□ 0.53
ATG4B-221ENST00000483778 PAK4O96013 591 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-221ENST00000483778 C1SP09871 688 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 UNGP13051 313 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-221ENST00000483778 L1CAMP32004 1257 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 RFC1P35251 1148 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-221ENST00000483778 CCNHP51946 323 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-221ENST00000483778 HDAC4P56524 1084 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 CT47A1Q5JQC4 288 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-221ENST00000483778 ZNF783Q6ZMS7 281 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 CLEC17AQ6ZS10 378 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 ZNF677Q86XU0 584 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 PYROXD2Q8N2H3 581 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 OXR1Q8N573 874 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 ARHGEF2Q92974 986 aaKnown RBP18.36■□□□□ 0.53
ATG4B-221ENST00000483778 LRIG1Q96JA1 1093 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 CCDC114Q96M63 670 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 HEPHQ9BQS7 1158 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 CALN1Q9BXU9 219 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 KLC2Q9H0B6 622 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 OSBPL2Q9H1P3 480 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 KLHL11Q9NVR0 708 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 GGT7Q9UJ14 662 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 FADS3Q9Y5Q0 445 aa18.36■□□□□ 0.53
ATG4B-221ENST00000483778 KIF26BQ2KJY2 2108 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 FFAR2O15552 330 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 LRIG2O94898 1065 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 PLEKP08567 350 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 ADRB3P13945 408 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 HNRNPA2B1P22626 353 aaKnown RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 RECQLP46063 649 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 COPB1P53618 953 aaKnown RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 SYCP1Q15431 976 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 SOWAHCQ53LP3 525 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 TPRG1LQ5T0D9 272 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 RETSATQ6NUM9 610 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 RWDD4Q6NW29 188 aaKnown RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 WDR59Q6PJI9 974 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 Q6ZSR6 202 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 PARS2Q7L3T8 475 aaKnown RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 ABI3BPQ7Z7G0 1075 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 PCDH20Q8N6Y1 951 aaKnown RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 MSANTD4Q8NCY6 345 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 SLC17A9Q9BYT1 436 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 CEP44Q9C0F1 390 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 NOL6Q9H6R4 1146 aaKnown RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 ZDHHC6Q9H6R6 413 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 DYRK4Q9NR20 520 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 HECAQ9UBI9 543 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-221ENST00000483778 ITM2BQ9Y287 266 aa18.35■□□□□ 0.53
ATG4B-221ENST00000483778 IGLON5A6NGN9 336 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 SPINT1O43278 529 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 TLX3O43711 291 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-221ENST00000483778 MAGEC1O60732 1142 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 RHOQP17081 205 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 ITIH2P19823 946 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 ITGB7P26010 798 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 AKT2P31751 481 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 ABL2P42684 1182 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 PTPN9P43378 593 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 NEK3P51956 506 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 INSM1Q01101 510 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-221ENST00000483778 NRG1Q02297 640 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-221ENST00000483778 ZNF211Q13398 564 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-221ENST00000483778 ATXN7L2Q5T6C5 722 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-221ENST00000483778 ACBD5Q5T8D3 534 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-221ENST00000483778 RBM43Q6ZSC3 357 aaKnown RBP18.34■□□□□ 0.53
ATG4B-221ENST00000483778 FAM172AQ8WUF8 416 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 HSD3B7Q9H2F3 369 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 KLF15Q9UIH9 416 aa18.34■□□□□ 0.53
ATG4B-221ENST00000483778 ANKRD36A6QL64 1941 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms