RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CACNA2D3Q8IZS8 1091 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 ACVR1CQ8NER5 493 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 OR7D4Q8NG98 312 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 OVCA2Q8WZ82 227 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 ALKBH8Q96BT7 664 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 IMP4Q96G21 291 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 TRMT2BQ96GJ1 504 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 ATXN7L3BQ96GX2 97 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 CABS1Q96KC9 395 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 NSMCE3Q96MG7 304 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 TBL1YQ9BQ87 522 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 RASSF4Q9H2L5 321 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 IL21Q9HBE4 155 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 PCMTD2Q9NV79 361 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 TRPM5Q9NZQ8 1165 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 KIAA1522Q9P206 1035 aaPredicted RBP8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZFATQ9P243 1243 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 FNIP2Q9P278 1114 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC2A6Q9UGQ3 507 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 GGT7Q9UJ14 662 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 SOX13Q9UN79 622 aa8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 RRP15Q9Y3B9 282 aaKnown RBP8.98□□□□□ -0.97
CDC42SE1-204ENST00000483763 TRANK1O15050 2925 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 DOCK6Q96HP0 2047 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 GREM1O60565 184 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 KRT38O76015 456 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ANXA9O76027 345 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 F11P03951 625 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ITGA2BP08514 1039 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 GBP2P32456 591 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 CD86P42081 329 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 KPNA1P52294 538 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 WNT3AP56704 352 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 MGAT5Q09328 741 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 MSLNQ13421 630 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 TAF12Q16514 161 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 SPANXN3Q5MJ09 141 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 TMEM240Q5SV17 173 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 TEDDM1Q5T9Z0 273 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 HHATQ5VTY9 493 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 CES4AQ5XG92 561 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 KDELC1Q6UW63 502 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 GAREM2Q75VX8 874 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 RASSF3Q86WH2 238 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 TEX26Q8N6G2 289 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 PNPLA1Q8N8W4 532 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 KLHL23Q8NBE8 558 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 PDZD8Q8NEN9 1154 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ARRDC2Q8TBH0 407 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ADAMTS19Q8TE59 1207 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZNF75CPQ92670 426 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 MECRQ9BV79 373 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 KIFC1Q9BW19 673 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 KLF16Q9BXK1 252 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 SP110Q9HB58 689 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 E2F8A0AVK6 867 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 TPP1O14773 563 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 TM9SF1O15321 606 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 TSPAN3O60637 253 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 HOXD9P28356 352 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 CCNFP41002 786 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 NPY2RP49146 381 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC11A2P49281 568 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ITKQ08881 620 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 PDE1CQ14123 709 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 PARP15Q460N3 678 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 LGSNQ5TDP6 509 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ESRP1Q6NXG1 681 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 RGS9BPQ6ZS82 235 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 CMC1Q7Z7K0 106 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 SPNS2Q8IVW8 549 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 NDUFAF2Q8N183 169 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 FIBCD1Q8N539 461 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC25A41Q8N5S1 370 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ARL14EPQ8N8R7 260 aaPredicted RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 CDK5RAP1Q96SZ6 601 aaKnown RBP8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 MCMBPQ9BTE3 642 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 FSD1LQ9BXM9 530 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 PITPNM3Q9BZ71 974 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ZBP1Q9H171 429 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 SLC25A51Q9H1U9 297 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 PDFQ9HBH1 243 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 PLLPQ9Y342 182 aa8.97□□□□□ -0.97
CDC42SE1-204ENST00000483763 ANAPC1Q9H1A4 1944 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 COPEO14579 308 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 PRAMEF11O60813 436 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 GSRP00390 522 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 CTSAP10619 480 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 GJA1P17302 382 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 GABRB3P28472 473 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 ELF1P32519 619 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 ERVFC1P60507 584 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 HTRA4P83105 476 aaPredicted RBP8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 GNA12Q03113 381 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 IL10RBQ08334 325 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 DLG2Q15700 870 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 CNGA3Q16281 694 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 ANO4Q32M45 955 aa8.96□□□□□ -0.98
CDC42SE1-204ENST00000483763 FSCBQ5H9T9 825 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms