RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 IPMKQ8NFU5 416 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 SHKBP1Q8TBC3 707 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 MICAL1Q8TDZ2 1067 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 TMA16Q96EY4 203 aaKnown RBP14.26□□□□□ -0.13
CLK3-204ENST00000483723 SMC6Q96SB8 1091 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 KIF9Q9HAQ2 790 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 MRM3Q9HC36 420 aaKnown RBP14.26□□□□□ -0.13
CLK3-204ENST00000483723 KCNK9Q9NPC2 374 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 LSM7Q9UK45 103 aaKnown RBP14.26□□□□□ -0.13
CLK3-204ENST00000483723 ARHGAP26Q9UNA1 814 aa14.26□□□□□ -0.13
CLK3-204ENST00000483723 LOC285095A0A1B0GVY8 99 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 GMNCA6NCL1 334 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 FAM47DPA6NHR8 397 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 GRXCR1A8MXD5 290 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 ATP9BO43861 1147 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 UGT1A9O60656 530 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 PMPCBO75439 489 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 GJA1P17302 382 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 CNTFP26441 200 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 MAXP61244 160 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 DSC2Q02487 901 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 PPARDQ03181 441 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 PKN3Q6P5Z2 889 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 LEKR1Q6ZMV7 388 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 TIFABQ6ZNK6 161 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 ZNF354CQ86Y25 554 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 PTCD2Q8WV60 388 aaKnown RBP14.25□□□□□ -0.13
CLK3-204ENST00000483723 CDKL2Q92772 493 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 MTBPQ96DY7 904 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 CERS2Q96G23 380 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 SGSM3Q96HU1 749 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 GCNAQ96QF7 691 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 MGME1Q9BQP7 344 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 UGT1A7Q9HAW7 530 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 UGT1A10Q9HAW8 530 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 UGT1A8Q9HAW9 530 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 MAN1C1Q9NR34 630 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 HCFC1R1Q9NWW0 138 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 DNMT3BQ9UBC3 853 aaKnown RBP14.25□□□□□ -0.13
CLK3-204ENST00000483723 OR51B4Q9Y5P0 310 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 DOCK6Q96HP0 2047 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 MIA3Q5JRA6 1907 aa14.25□□□□□ -0.13
CLK3-204ENST00000483723 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 HMX2A2RU54 273 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 MUSKO15146 869 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 TBL1XO60907 577 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 RFPL2O75678 378 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ZMPSTE24O75844 475 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 KRT37O76014 449 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 LUC7L3O95232 432 aaKnown RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 PAPLNO95428 1278 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 EPOP01588 193 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CKMP06732 381 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 KRT4P19013 534 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CD86P42081 329 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SEC24CP53992 1094 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 OXCT1P55809 520 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 WDR4P57081 412 aaKnown RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 DNAJC3Q13217 504 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 MPP7Q5T2T1 576 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 STXBP5Q5T5C0 1151 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 IL31Q6EBC2 164 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 FAM109BQ6ICB4 259 aaPredicted RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 CES3Q6UWW8 571 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLK3-204ENST00000483723 BANPQ8N9N5 519 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLK3-204ENST00000483723 LEMD2Q8NC56 503 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ZNF669Q96BR6 464 aaPredicted RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 MFSD3Q96ES6 412 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ALG14Q96F25 216 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ZNF317Q96PQ6 595 aaPredicted RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 PSKH2Q96QS6 385 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 TGS1Q96RS0 853 aaKnown RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 RANBP9Q96S59 729 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 POLR1EQ9GZS1 481 aaKnown RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 PPANQ9NQ55 473 aaKnown RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 CHRAC1Q9NRG0 131 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CFAP97Q9P2B7 532 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 UBA2Q9UBT2 640 aaPredicted RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 PRKAG3Q9UGI9 489 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SEPT3Q9UH03 358 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 LEFTY2O00292 366 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 KRT38O76015 456 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ASMTLO95671 621 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CD160O95971 181 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 MT-ND3P03897 115 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CA3P07451 260 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 EPCAMP16422 314 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CR2P20023 1033 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ADRA1DP25100 572 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 NMBRP28336 390 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 DMTNQ08495 405 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 ITKQ08881 620 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 CYTH1Q15438 398 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 SHHQ15465 462 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 RNF219Q5W0B1 726 aaPredicted RBP14.24□□□□□ -0.13
CLK3-204ENST00000483723 PACS1Q6VY07 963 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 C4orf33Q8N1A6 199 aa14.24□□□□□ -0.13
CLK3-204ENST00000483723 BBS5Q8N3I7 341 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms