RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CCNHP51946 323 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-225ENST00000483506 HADHBP55084 474 aaKnown RBP18.32■□□□□ 0.52
HDAC6-225ENST00000483506 TAS2R40P59535 323 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 CNTN1Q12860 1018 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 AASDHQ4L235 1098 aaPredicted RBP18.32■□□□□ 0.52
HDAC6-225ENST00000483506 KIAA0895LQ68EN5 471 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 TMTC1Q8IUR5 882 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 OR2AP1Q8NGE2 309 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 BIRC7Q96CA5 298 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 RMDN1Q96DB5 314 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 CELF6Q96J87 481 aaKnown RBP18.32■□□□□ 0.52
HDAC6-225ENST00000483506 LRIG1Q96JA1 1093 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 HEPHQ9BQS7 1158 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 ORAI3Q9BRQ5 295 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 IMPACTQ9P2X3 320 aa18.32■□□□□ 0.52
HDAC6-225ENST00000483506 RNF103O00237 685 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 GDF9O60383 454 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 LEFTY1O75610 366 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 KRT7P08729 469 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 GNSP15586 552 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 CYLC1P35663 651 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-225ENST00000483506 PAPOLAP51003 745 aaKnown RBP18.31■□□□□ 0.52
HDAC6-225ENST00000483506 CCR5P51681 352 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 CDH6P55285 790 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 SNRPD1P62314 119 aaKnown RBP18.31■□□□□ 0.52
HDAC6-225ENST00000483506 IRX4P78413 519 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 PDK2Q15119 407 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 RSPO4Q2I0M5 234 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-225ENST00000483506 PIP5KL1Q5T9C9 394 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 NCEH1Q6PIU2 408 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 ZNF354CQ86Y25 554 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 RGL4Q8IZJ4 473 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 ARRDC3Q96B67 414 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 ZNF670Q9BS34 389 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 NUSAP1Q9BXS6 441 aaKnown RBP18.31■□□□□ 0.52
HDAC6-225ENST00000483506 HDAC8Q9BY41 377 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 ETNK2Q9NVF9 386 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 HECAQ9UBI9 543 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-225ENST00000483506 UBA2Q9UBT2 640 aaPredicted RBP18.31■□□□□ 0.52
HDAC6-225ENST00000483506 SLC6A14Q9UN76 642 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 CACNA1AO00555 2505 aa18.31■□□□□ 0.52
HDAC6-225ENST00000483506 A0A1B0GTW7 788 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-225ENST00000483506 SLC30A4O14863 429 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 AMPD1P23109 780 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 ITGB7P26010 798 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 CD27P26842 260 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 MAOBP27338 520 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 MAGEA1P43355 309 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 DPYSL3Q14195 570 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 KRT81Q14533 505 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 MESDQ14696 234 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 ARSIQ5FYB1 569 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 TMCO3Q6UWJ1 677 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-225ENST00000483506 LEKR1Q6ZMV7 388 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 OR14C36Q8NHC7 312 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 GRIN3AQ8TCU5 1115 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 FAF2Q96CS3 445 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 PPP1R16AQ96I34 528 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 EDEM2Q9BV94 578 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 TM6SF2Q9BZW4 377 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 EIF2B4Q9UI10 523 aaKnown RBP18.3■□□□□ 0.52
HDAC6-225ENST00000483506 CDV3Q9UKY7 258 aaKnown RBP18.3■□□□□ 0.52
HDAC6-225ENST00000483506 MFHAS1Q9Y4C4 1052 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 PCDHA13Q9Y5I0 950 aa18.3■□□□□ 0.52
HDAC6-225ENST00000483506 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
HDAC6-225ENST00000483506 A0A0A6YYK5 440 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 SOWAHDA6NJG2 315 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 ZNF487B1APH4 448 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 J3KR12 359 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 PLK4O00444 970 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 KPNA3O00505 521 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 BCAT2O15382 392 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 LATO43561 262 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 NDUFA10O95299 355 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 POP4O95707 220 aaKnown RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 CD48P09326 243 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 SERPINB6P35237 376 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 SLC1A1P43005 524 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 SSR1P43307 286 aaKnown RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 ID4P47928 161 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 DNA2P51530 1060 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 TAS2R38P59533 333 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 IL10RBQ08334 325 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 RFTN1Q14699 578 aaPredicted RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 CYTH1Q15438 398 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 SPA17Q15506 151 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 MYLK3Q32MK0 819 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 ATP13A4Q4VNC1 1196 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 LRRC38Q5VT99 294 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 TRIM69Q86WT6 500 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 VSIG1Q86XK7 387 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 ZCCHC9Q8N567 271 aaKnown RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 GDAP1L1Q96MZ0 367 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 OSBPL1AQ9BXW6 950 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 PREBQ9HCU5 417 aa18.29■□□□□ 0.52
HDAC6-225ENST00000483506 LUC7LQ9NQ29 371 aaKnown RBP18.29■□□□□ 0.52
HDAC6-225ENST00000483506 LHX3Q9UBR4 397 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms