RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CD59P13987 128 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 MIPP30301 263 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 CASP14P31944 242 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 CCNHP51946 323 aaPredicted RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 ZNF135P52742 658 aaPredicted RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 SNRPD1P62314 119 aaKnown RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 PPP2CBP62714 309 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 PPP2CAP67775 309 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 ACAP1Q15027 740 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 PIP5KL1Q5T9C9 394 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 ERN2Q76MJ5 926 aaKnown RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 TRIM69Q86WT6 500 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 PSTKQ8IV42 348 aaKnown RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 UMODL1-AS1Q8N2C9 162 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 CASKIN2Q8WXE0 1202 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 ARRDC3Q96B67 414 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 SERAC1Q96JX3 654 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 SNRNP25Q9BV90 132 aaKnown RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 HDAC8Q9BY41 377 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 TM6SF2Q9BZW4 377 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 HECAQ9UBI9 543 aaPredicted RBP14.14□□□□□ -0.15
VARS-225ENST00000482996 DMTF1Q9Y222 760 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 SNX11Q9Y5W9 270 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 WASF2Q9Y6W5 498 aa14.14□□□□□ -0.15
VARS-225ENST00000482996 CHD8Q9HCK8 2581 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 A0A087X0T9 212 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 C10orf142B7Z368 130 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 VILLO15195 856 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 DFNA5O60443 496 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 CD160O95971 181 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 FAM228BP0C875 321 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 CD38P28907 300 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 PCK1P35558 622 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 CTSKP43235 329 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 PIGHQ14442 188 aaPredicted RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 SUZ12Q15022 739 aaKnown RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 TSR1Q2NL82 804 aaKnown RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 SETMARQ53H47 684 aaPredicted RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 CCDC122Q5T0U0 273 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 SPECC1LQ69YQ0 1117 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 NAPEPLDQ6IQ20 393 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 NEK5Q6P3R8 708 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 ALKBH5Q6P6C2 394 aaKnown RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 LAYNQ6UX15 382 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 LEKR1Q6ZMV7 388 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 NAXDQ8IW45 347 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 ARFGAP1Q8N6T3 406 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 RNF214Q8ND24 703 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 HMCESQ96FZ2 354 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 PEBP4Q96S96 227 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 NOL6Q9H6R4 1146 aaKnown RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 ZDHHC6Q9H6R6 413 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 EBF2Q9HAK2 575 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 IL21RQ9HBE5 538 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 TM7SF3Q9NS93 570 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 ZNHIT6Q9NWK9 470 aaKnown RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 FNDC3AQ9Y2H6 1198 aaKnown RBP14.13□□□□□ -0.15
VARS-225ENST00000482996 PCDHB9Q9Y5E1 797 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 PCDHGB2Q9Y5G2 931 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 ACTL7AQ9Y615 435 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 CHD5Q8TDI0 1954 aa14.13□□□□□ -0.15
VARS-225ENST00000482996 SH3BP5O60239 455 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 RNGTTO60942 597 aaKnown RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 LRCH4O75427 683 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 TMCC1O94876 653 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 POP4O95707 220 aaKnown RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 ITGB7P26010 798 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 PMLP29590 882 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 MAT2AP31153 395 aaKnown RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 HNRNPH3P31942 346 aaKnown RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 CCT8P50990 548 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 NEK3P51956 506 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 NDST2P52849 883 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 TAS2R38P59533 333 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 RAD51Q06609 339 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 SERINC3Q13530 473 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 CA9Q16790 459 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 INO80DQ53TQ3 878 aaPredicted RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 PPP6R3Q5H9R7 873 aaPredicted RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 FBXL19Q6PCT2 694 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 OR2AP1Q8NGE2 309 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 OR8K1Q8NGG5 319 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 SETD7Q8WTS6 366 aaKnown RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 LRIG1Q96JA1 1093 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 GDAP1L1Q96MZ0 367 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 KCTD15Q96SI1 283 aaPredicted RBP14.12□□□□□ -0.15
VARS-225ENST00000482996 THAP2Q9H0W7 228 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 ARHGAP20Q9P2F6 1191 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 ANGPTL2Q9UKU9 493 aa14.12□□□□□ -0.15
VARS-225ENST00000482996 A0A1W2PQU0 124 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 ARHGAP42A6NI28 874 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 KRIT1O00522 736 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 MAGEC1O60732 1142 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 PCDH8O95206 1070 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 IGSF6O95976 241 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 CYP1A2P05177 515 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 EIF4A3P38919 411 aaKnown RBP14.11□□□□□ -0.15
VARS-225ENST00000482996 RHOAP61586 193 aa14.11□□□□□ -0.15
VARS-225ENST00000482996 SIM1P81133 766 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms