RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 LMNB2Q03252 620 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 NSUN2Q08J23 767 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC78-212ENST00000482152 PAFAH1B3Q15102 231 aaKnown RBP16.61■□□□□ 0.25
CCDC78-212ENST00000482152 DUOXA1Q1HG43 343 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 MYLK3Q32MK0 819 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 ARSIQ5FYB1 569 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 NEK5Q6P3R8 708 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 KIAA1328Q86T90 577 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 CACUL1Q86Y37 369 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 SLC41A1Q8IVJ1 513 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 AADATQ8N5Z0 425 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 NPWQ8N729 165 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 OR2T34Q8NGX1 318 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 PIGKQ92643 395 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 HSPA12BQ96MM6 686 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 GDAP1L1Q96MZ0 367 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 MAK16Q9BXY0 300 aaKnown RBP16.61■□□□□ 0.25
CCDC78-212ENST00000482152 HDAC8Q9BY41 377 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 GRPEL1Q9HAV7 217 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 SP110Q9HB58 689 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 CD93Q9NPY3 652 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 EVLQ9UI08 416 aaPredicted RBP16.61■□□□□ 0.25
CCDC78-212ENST00000482152 IPO11Q9UI26 975 aaKnown RBP16.61■□□□□ 0.25
CCDC78-212ENST00000482152 SARDHQ9UL12 918 aa16.61■□□□□ 0.25
CCDC78-212ENST00000482152 CHD5Q8TDI0 1954 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 PIEZO1Q92508 2521 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 J3KR12 359 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 KHNYNO15037 678 aaKnown RBP16.6■□□□□ 0.25
CCDC78-212ENST00000482152 LEFTY1O75610 366 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 PALMO75781 387 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 IGSF6O95976 241 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 CD48P09326 243 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 ZFXP17010 805 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-212ENST00000482152 DRD3P35462 400 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 GJC1P36383 396 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 NUDT1P36639 197 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 CSNK1DP48730 415 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 CCR5P51681 352 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 RHOAP61586 193 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 KIF5AQ12840 1032 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 CYTH1Q15438 398 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-212ENST00000482152 DAAM2Q86T65 1068 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 RGL4Q8IZJ4 473 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 BBS5Q8N3I7 341 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 C12orf50Q8NA57 414 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-212ENST00000482152 TPCN2Q8NHX9 752 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 PCDH19Q8TAB3 1148 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 HCAR2Q8TDS4 363 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 NSMCE1Q8WV22 266 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 RNF157Q96PX1 679 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 CPEB1Q9BZB8 566 aaKnown RBP16.6■□□□□ 0.25
CCDC78-212ENST00000482152 ETNK2Q9NVF9 386 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 HAUS2Q9NVX0 235 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 REXO2Q9Y3B8 237 aaKnown RBP16.6■□□□□ 0.25
CCDC78-212ENST00000482152 DMDP11532 3685 aa16.6■□□□□ 0.25
CCDC78-212ENST00000482152 LRRD1A4D1F6 860 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 MEI4A8MW99 385 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 KPNA3O00505 521 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 ARHGAP6O43182 974 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 PLRG1O43660 514 aaKnown RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 CTSLP07711 333 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 MX2P20592 715 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 ITPKAP23677 461 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 ITGB7P26010 798 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 HSPA9P38646 679 aaKnown RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 MAPK8P45983 427 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 NAP1L1P55209 391 aaKnown RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 MMRN1Q13201 1228 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 DCAF12L1Q5VU92 463 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 KIAA0895LQ68EN5 471 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 TIGD7Q6NT04 549 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 SLC23A3Q6PIS1 610 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 PRR23CQ6ZRP0 262 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 ERN2Q76MJ5 926 aaKnown RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 ZSCAN30Q86W11 494 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 CPNE8Q86YQ8 564 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 RYBPQ8N488 228 aaPredicted RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 CHST14Q8NCH0 376 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 OR14C36Q8NHC7 312 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 RAPGEF5Q92565 580 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 FATE1Q969F0 183 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 RAB7BQ96AH8 199 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 NUSAP1Q9BXS6 441 aaKnown RBP16.59■□□□□ 0.25
CCDC78-212ENST00000482152 TM6SF2Q9BZW4 377 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 PREBQ9HCU5 417 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 PARD6AQ9NPB6 346 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 SEPT3Q9UH03 358 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 ACTL7AQ9Y615 435 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 WASF2Q9Y6W5 498 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 USP34Q70CQ2 3546 aa16.59■□□□□ 0.25
CCDC78-212ENST00000482152 MAFKO60675 156 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 SERPINF2P08697 491 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 CD27P26842 260 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 SUOXP51687 545 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 ADPRHP54922 357 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 CNTN1Q12860 1018 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 ZNF805Q5CZA5 627 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 NCBP2-AS2Q69YL0 99 aa16.58■□□□□ 0.24
CCDC78-212ENST00000482152 NCEH1Q6PIU2 408 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms