RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 DCDC2Q9UHG0 476 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 C2orf71A6NGG8 1288 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 DNAJC8O75937 253 aaPredicted RBP16.01■□□□□ 0.15
RXRA-202ENST00000481739 ADRA1AP35348 466 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 ATP5C1P36542 298 aaKnown RBP16.01■□□□□ 0.15
RXRA-202ENST00000481739 LIMK2P53671 638 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 PDE1BQ01064 536 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 C5orf22Q49AR2 442 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 FBXL22Q6P050 247 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 OTOP3Q7RTS5 596 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 OTOAQ7RTW8 1153 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 MICALL1Q8N3F8 863 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 USP33Q8TEY7 942 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 SAMD11Q96NU1 681 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 RBBP8Q99708 897 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 TSSK1BQ9BXA7 367 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 PRKD2Q9BZL6 878 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 NOL6Q9H6R4 1146 aaKnown RBP16.01■□□□□ 0.15
RXRA-202ENST00000481739 SP110Q9HB58 689 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 SLCO1B3Q9NPD5 702 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 PCMTD2Q9NV79 361 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 NDFIP2Q9NV92 336 aa16.01■□□□□ 0.15
RXRA-202ENST00000481739 YBX2Q9Y2T7 364 aaKnown RBP16.01■□□□□ 0.15
RXRA-202ENST00000481739 NUP205Q92621 2012 aa16■□□□□ 0.15
RXRA-202ENST00000481739 ATP9BO43861 1147 aa16■□□□□ 0.15
RXRA-202ENST00000481739 RAMP2O60895 175 aa16■□□□□ 0.15
RXRA-202ENST00000481739 TBX18O95935 607 aa16■□□□□ 0.15
RXRA-202ENST00000481739 HLA-DQB2P05538 268 aa16■□□□□ 0.15
RXRA-202ENST00000481739 PAMP19021 973 aa16■□□□□ 0.15
RXRA-202ENST00000481739 PBX2P40425 430 aa16■□□□□ 0.15
RXRA-202ENST00000481739 SKIV2L2P42285 1042 aaKnown RBP16■□□□□ 0.15
RXRA-202ENST00000481739 PPP3CCP48454 512 aa16■□□□□ 0.15
RXRA-202ENST00000481739 SERPINB8P50452 374 aa16■□□□□ 0.15
RXRA-202ENST00000481739 GPM6BQ13491 265 aa16■□□□□ 0.15
RXRA-202ENST00000481739 UGP2Q16851 508 aa16■□□□□ 0.15
RXRA-202ENST00000481739 GALNTL6Q49A17 601 aa16■□□□□ 0.15
RXRA-202ENST00000481739 CERCAMQ5T4B2 595 aa16■□□□□ 0.15
RXRA-202ENST00000481739 MARC1Q5VT66 337 aa16■□□□□ 0.15
RXRA-202ENST00000481739 PKN3Q6P5Z2 889 aa16■□□□□ 0.15
RXRA-202ENST00000481739 KCNMB4Q86W47 210 aa16■□□□□ 0.15
RXRA-202ENST00000481739 KREMEN2Q8NCW0 462 aa16■□□□□ 0.15
RXRA-202ENST00000481739 PPHLN1Q8NEY8 458 aaKnown RBP16■□□□□ 0.15
RXRA-202ENST00000481739 GABPB2Q8TAK5 448 aaPredicted RBP16■□□□□ 0.15
RXRA-202ENST00000481739 SPOCK2Q92563 424 aa16■□□□□ 0.15
RXRA-202ENST00000481739 AZIN2Q96A70 460 aa16■□□□□ 0.15
RXRA-202ENST00000481739 FCRL3Q96P31 734 aaPredicted RBP16■□□□□ 0.15
RXRA-202ENST00000481739 TRIM55Q9BYV6 548 aa16■□□□□ 0.15
RXRA-202ENST00000481739 ARNT2Q9HBZ2 717 aa16■□□□□ 0.15
RXRA-202ENST00000481739 TRPM5Q9NZQ8 1165 aa16■□□□□ 0.15
RXRA-202ENST00000481739 SIRPGQ9P1W8 387 aa16■□□□□ 0.15
RXRA-202ENST00000481739 IRAK3Q9Y616 596 aa16■□□□□ 0.15
RXRA-202ENST00000481739 CAPN7Q9Y6W3 813 aa16■□□□□ 0.15
RXRA-202ENST00000481739 F5H5T6 163 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 GLUD1P00367 558 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 LRG1P02750 347 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 ALDOAP04075 364 aaKnown RBP15.99■□□□□ 0.15
RXRA-202ENST00000481739 ERVK-10P10266 1014 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 HMGA1P17096 107 aaKnown RBP15.99■□□□□ 0.15
RXRA-202ENST00000481739 MAGEA12P43365 314 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 POLD2P49005 469 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 IL10RBQ08334 325 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 TEDDM1Q5T9Z0 273 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 CDHR3Q6ZTQ4 885 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 CCDC149Q6ZUS6 474 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 DNAJB7Q7Z6W7 309 aaPredicted RBP15.99■□□□□ 0.15
RXRA-202ENST00000481739 ITIH5Q86UX2 942 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 LCA5Q86VQ0 697 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 UNC5BQ8IZJ1 945 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 TEX26Q8N6G2 289 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 PLD4Q96BZ4 506 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 HMCESQ96FZ2 354 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 MYRFLQ96LU7 910 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 C7orf26Q96N11 449 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 RPRD1AQ96P16 312 aaPredicted RBP15.99■□□□□ 0.15
RXRA-202ENST00000481739 SLC13A1Q9BZW2 595 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 NACA2Q9H009 215 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 CCSER2Q9H7U1 834 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 ZNF212Q9UDV6 495 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 MSRAQ9UJ68 235 aa15.99■□□□□ 0.15
RXRA-202ENST00000481739 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.98■□□□□ 0.15
RXRA-202ENST00000481739 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.98■□□□□ 0.15
RXRA-202ENST00000481739 CFAP73A6NFT4 308 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 TPP1O14773 563 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 ATP5HO75947 161 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 PEX11BO96011 259 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 IRS1P35568 1242 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 SLC11A2P49281 568 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 HARS2P49590 506 aaKnown RBP15.98■□□□□ 0.15
RXRA-202ENST00000481739 CDK18Q07002 472 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 ILF2Q12905 390 aaKnown RBP15.98■□□□□ 0.15
RXRA-202ENST00000481739 POLD3Q15054 466 aaPredicted RBP15.98■□□□□ 0.15
RXRA-202ENST00000481739 RAP1GAP2Q684P5 730 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 LILRA6Q6PI73 481 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 RANBP10Q6VN20 620 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 IPMKQ8NFU5 416 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 C10orf82Q8WW14 230 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 MFSD3Q96ES6 412 aa15.98■□□□□ 0.15
RXRA-202ENST00000481739 IMP4Q96G21 291 aaKnown RBP15.98■□□□□ 0.15
RXRA-202ENST00000481739 TRMT2BQ96GJ1 504 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms