RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 POLD3Q15054 466 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 CDO1Q16878 200 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 CLEC16AQ2KHT3 1053 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 C15orf59Q2T9L4 293 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 TMEM259Q4ZIN3 620 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 CARD16Q5EG05 197 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 CCDC183Q5T5S1 534 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 LINGO4Q6UY18 593 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 KANSL1Q7Z3B3 1105 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 SPATS2Q86XZ4 545 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 GATAD2AQ86YP4 633 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 GRIN3AQ8TCU5 1115 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 FAM172AQ8WUF8 416 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 TSC1Q92574 1164 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 ARRDC3Q96B67 414 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 ARHGEF26Q96DR7 871 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 KLHDC7BQ96G42 594 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 PCMTD1Q96MG8 357 aaPredicted RBP12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 SPON2Q9BUD6 331 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 OSBPL1AQ9BXW6 950 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 NEU3Q9UQ49 428 aa12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 TDRD6O60522 2096 aaKnown RBP12.37□□□□□ -0.43
SQSTM1-207ENST00000481335 CELSR3Q9NYQ7 3312 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 A0A1W2PQU0 124 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 A6NNZ2 444 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 GSRP00390 522 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ADRB3P13945 408 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 FERP16591 822 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 GPD1P21695 349 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 GLDCP23378 1020 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ACADVLP49748 655 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 CCNHP51946 323 aaPredicted RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 HDAC4P56524 1084 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 SNRPD1P62314 119 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 UBXN1Q04323 297 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ZNF284Q2VY69 593 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 POM121L1PQ3SYA9 428 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 HS1BP3Q53T59 392 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ARSIQ5FYB1 569 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 RWDD4Q6NW29 188 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 MON1BQ7L1V2 547 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ABI3BPQ7Z7G0 1075 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 SLFN11Q7Z7L1 901 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 DRC7Q8IY82 874 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 CHST14Q8NCH0 376 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 DENND6BQ8NEG7 585 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 JOSD2Q8TAC2 188 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 SLC30A5Q8TAD4 765 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ARHGEF2Q92974 986 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 VCPIP1Q96JH7 1222 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 FEM1CQ96JP0 617 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 EIF3CQ99613 913 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 NAT10Q9H0A0 1025 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 TNKS2Q9H2K2 1166 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 GPR27Q9NS67 375 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 KLHL11Q9NVR0 708 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 HS3ST3A1Q9Y663 406 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 ADAMTS20P59510 1910 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 MYLKQ15746 1914 aa12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 URB1O60287 2271 aaKnown RBP12.36□□□□□ -0.43
SQSTM1-207ENST00000481335 TCRBV5S1A1TA0A578 114 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 GOLGA8CPA6NN73 597 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 TSPAN6O43657 245 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 PCDH8O95206 1070 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 CD160O95971 181 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 PLEKP08567 350 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 CKMT2P17540 419 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 CDK11BP21127 795 aaKnown RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 ACP1P24666 158 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 RFC1P35251 1148 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 ZNF143P52747 638 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 YBEYP58557 167 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 CAMK2BQ13554 666 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 INO80DQ53TQ3 878 aaPredicted RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 EFHC2Q5JST6 749 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 DNAJC24Q6P3W2 148 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 FBXL19Q6PCT2 694 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 WDR59Q6PJI9 974 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 DHRS13Q6UX07 377 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 KYAT3Q6YP21 454 aaKnown RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 APTXQ7Z2E3 356 aaKnown RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 EID2Q8N6I1 236 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 RTL3Q8N8U3 475 aaKnown RBP12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 OR2AP1Q8NGE2 309 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 RFFLQ8WZ73 363 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 PCDHB18PQ96TA0 734 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 EPAS1Q99814 870 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 AGPAT1Q99943 283 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 BPIFA3Q9BQP9 254 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 CATSPERBQ9H7T0 1116 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 SCUBE2Q9NQ36 999 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 EVA1BQ9NVM1 165 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 FADS3Q9Y5Q0 445 aa12.35□□□□□ -0.43
SQSTM1-207ENST00000481335 ITPR1Q14643 2758 aa12.34□□□□□ -0.43
SQSTM1-207ENST00000481335 NEMP2A6NFY4 417 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms