RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 HEPHQ9BQS7 1158 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.33■□□□□ 0.36
HSPG2-209ENST00000480900 HDAC8Q9BY41 377 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 TSPY26PQ9H489 355 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 IL21RQ9HBE5 538 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 GPATCH2LQ9NWQ4 482 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 PCDHGB2Q9Y5G2 931 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 SNX11Q9Y5W9 270 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 ACTL7AQ9Y615 435 aa17.33■□□□□ 0.36
HSPG2-209ENST00000480900 TDRD6O60522 2096 aaKnown RBP17.32■□□□□ 0.36
HSPG2-209ENST00000480900 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 PRPSAP2O60256 369 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 LEFTY1O75610 366 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 GSRP00390 522 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 MIPP30301 263 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 CTSKP43235 329 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 DNA2P51530 1060 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 CCNHP51946 323 aaPredicted RBP17.32■□□□□ 0.36
HSPG2-209ENST00000480900 C21orf59P57076 290 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 TAS2R38P59533 333 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 ACAP1Q15027 740 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 ARSIQ5FYB1 569 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 LAYNQ6UX15 382 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 CYP4V2Q6ZWL3 525 aaPredicted RBP17.32■□□□□ 0.36
HSPG2-209ENST00000480900 ERN2Q76MJ5 926 aaKnown RBP17.32■□□□□ 0.36
HSPG2-209ENST00000480900 PRPF39Q86UA1 669 aaKnown RBP17.32■□□□□ 0.36
HSPG2-209ENST00000480900 CASKIN2Q8WXE0 1202 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 SERAC1Q96JX3 654 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 PEBP4Q96S96 227 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 SNRNP25Q9BV90 132 aaKnown RBP17.32■□□□□ 0.36
HSPG2-209ENST00000480900 TM6SF2Q9BZW4 377 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 AASDHPPTQ9NRN7 309 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 TM7SF3Q9NS93 570 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 MYO1AQ9UBC5 1043 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 PCSK1NQ9UHG2 260 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 DMTF1Q9Y222 760 aa17.32■□□□□ 0.36
HSPG2-209ENST00000480900 GOLGA4Q13439 2230 aaKnown RBP17.32■□□□□ 0.36
HSPG2-209ENST00000480900 SHROOM3Q8TF72 1996 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 RASA4BC9J798 803 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 RASA4O43374 803 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 DFNA5O60443 496 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 LRCH4O75427 683 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 ITGB7P26010 798 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 CD38P28907 300 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 HNRNPH3P31942 346 aaKnown RBP17.31■□□□□ 0.36
HSPG2-209ENST00000480900 CASP14P31944 242 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 PCK1P35558 622 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 ZNF135P52742 658 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-209ENST00000480900 SHC2P98077 582 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 SERINC3Q13530 473 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 TRIM14Q14142 442 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 ZNF423Q2M1K9 1284 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 SETMARQ53H47 684 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-209ENST00000480900 SLC45A4Q5BKX6 768 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 KCNT1Q5JUK3 1230 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 NAPEPLDQ6IQ20 393 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 NEK5Q6P3R8 708 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 ZNF354CQ86Y25 554 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 NAXDQ8IW45 347 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 HMCESQ96FZ2 354 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 LRIG1Q96JA1 1093 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 DHX35Q9H5Z1 703 aaKnown RBP17.31■□□□□ 0.36
HSPG2-209ENST00000480900 ARHGAP20Q9P2F6 1191 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 HECAQ9UBI9 543 aaPredicted RBP17.31■□□□□ 0.36
HSPG2-209ENST00000480900 CACNA1BQ00975 2339 aa17.31■□□□□ 0.36
HSPG2-209ENST00000480900 A0A087X0T9 212 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 A0A1W2PR77 199 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 RNF103O00237 685 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 EEF2KO00418 725 aaKnown RBP17.3■□□□□ 0.36
HSPG2-209ENST00000480900 BUB1O43683 1085 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 SH3BP5O60239 455 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 WNT1P04628 370 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 FAM228BP0C875 321 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 CCT8P50990 548 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 NEK3P51956 506 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 SNRPD1P62314 119 aaKnown RBP17.3■□□□□ 0.36
HSPG2-209ENST00000480900 CA9Q16790 459 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 INO80DQ53TQ3 878 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-209ENST00000480900 SPECC1LQ69YQ0 1117 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 DBX2Q6ZNG2 339 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 OR2AP1Q8NGE2 309 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 KCTD15Q96SI1 283 aaPredicted RBP17.3■□□□□ 0.36
HSPG2-209ENST00000480900 KLC2Q9H0B6 622 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 ZDHHC6Q9H6R6 413 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 ANGPTL2Q9UKU9 493 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 KNTC1P50748 2209 aa17.3■□□□□ 0.36
HSPG2-209ENST00000480900 SPAARA0A1B0GVQ0 90 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 H0Y8X5 98 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 FLRT2O43155 660 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 RNGTTO60942 597 aaKnown RBP17.29■□□□□ 0.36
HSPG2-209ENST00000480900 TMCC1O94876 653 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 POP4O95707 220 aaKnown RBP17.29■□□□□ 0.36
HSPG2-209ENST00000480900 MAT2AP31153 395 aaKnown RBP17.29■□□□□ 0.36
HSPG2-209ENST00000480900 NDST2P52849 883 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 SIM1P81133 766 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-209ENST00000480900 PIGHQ14442 188 aaPredicted RBP17.29■□□□□ 0.36
HSPG2-209ENST00000480900 NFKBIBQ15653 356 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 ALKBH5Q6P6C2 394 aaKnown RBP17.29■□□□□ 0.36
HSPG2-209ENST00000480900 LEKR1Q6ZMV7 388 aa17.29■□□□□ 0.36
HSPG2-209ENST00000480900 RFX8Q6ZV50 586 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms