RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 FCRL2Q96LA5 508 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 Q96M66 194 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 PRMT1Q99873 361 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 LSM14BQ9BX40 385 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 BBS2Q9BXC9 721 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ISCUQ9H1K1 167 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 OSBPL2Q9H1P3 480 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 VPS16Q9H269 839 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TMEM245Q9H330 911 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ATP13A1Q9HD20 1204 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 PRDM7Q9NQW5 492 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ARHGEF4Q9NR80 690 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 ST7Q9NRC1 585 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 SPATA6Q9NWH7 488 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 SMPD4Q9NXE4 827 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 TAB2Q9NYJ8 693 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 THAP10Q9P2Z0 257 aaPredicted RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 PPARGC1AQ9UBK2 798 aaKnown RBP5.06□□□□□ -1.6
PTCD3-213ENST00000480102 KLHL3Q9UH77 587 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 GVINP1Q7Z2Y8 2422 aa5.06□□□□□ -1.6
PTCD3-213ENST00000480102 VPS13AQ96RL7 3174 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 A0A1B0GVM2 712 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 A0A1W2PQF6 199 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SLC12A8A0AV02 714 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 TARSL2A2RTX5 802 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 TBC1D3BA6NDS4 549 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 TCAF2A6NFQ2 919 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 C2CD4BA6NLJ0 364 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SIGLEC16A6NMB1 481 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 PRR5-ARHGAP8B1AHC4 643 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 H0Y858 1186 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CAPN9O14815 690 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ALOX15BO15296 676 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CBFA2T2O43439 604 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 DNAJA2O60884 412 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 LUC7L3O95232 432 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 EGFP01133 1207 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SRPRAP08240 638 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 DLDP09622 509 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 LCP1P13796 627 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CHRNB2P17787 502 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ABCB4P21439 1286 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CD72P21854 359 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 NUDT1P36639 197 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ETFBP38117 255 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 NSFP46459 744 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SOX9P48436 509 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 LIMK1P53667 647 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CDH4P55283 916 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ARHGAP8P85298 464 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ZBED6P86452 979 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SATB1Q01826 763 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ARID5AQ03989 594 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CSTF1Q05048 431 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SLC20A2Q08357 652 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 EFEMP1Q12805 493 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 RAPGEF1Q13905 1077 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 TCEAL1Q15170 157 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ARHGAP44Q17R89 818 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CLEC16AQ2KHT3 1053 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 USP39Q53GS9 565 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 RABGAP1LQ5R372 815 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SYPL2Q5VXT5 272 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 PLEKHA7Q6IQ23 1121 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SDE2Q6IQ49 451 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ACAD10Q6JQN1 1059 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 GJB7Q6PEY0 223 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 LRSAM1Q6UWE0 723 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 NOP9Q86U38 636 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ADIPOR2Q86V24 386 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 VPS36Q86VN1 386 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 VSIG1Q86XK7 387 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 MIB1Q86YT6 1006 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 DENND1CQ8IV53 801 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 AOPEPQ8N6M6 819 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ATP6V0D2Q8N8Y2 350 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CADM4Q8NFZ8 388 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 GAB3Q8WWW8 586 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 FAM149B1Q96BN6 582 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 DNAJC7Q99615 494 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 AGPAT1Q99943 283 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 FBRSL1Q9HCM7 1045 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 FAM207AQ9NSI2 230 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ELOVL2Q9NXB9 296 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 ADAMTS1Q9UHI8 967 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 RASAL2Q9UJF2 1139 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 AJAP1Q9UKB5 411 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 CAPN11Q9UMQ6 739 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 NDRG2Q9UN36 371 aaKnown RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 SLC8A2Q9UPR5 921 aa5.05□□□□□ -1.6
PTCD3-213ENST00000480102 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.05□□□□□ -1.62e-10■□□□□ 8.1
PTCD3-213ENST00000480102 KIF26AQ9ULI4 1882 aaPredicted RBP5.05□□□□□ -1.6
PTCD3-213ENST00000480102 C2orf16Q68DN1 1984 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SSU72P8A0A1W2PR75 194 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 SYCE3A1L190 88 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 ANKRD62A6NC57 917 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 WASH4PA8MWX3 477 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 PRRT4C9JH25 899 aa5.04□□□□□ -1.6
PTCD3-213ENST00000480102 GOLGA6L19H0YKK7 550 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms