RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 USP3Q9Y6I4 520 aa14.89□□□□□ -0.03
USP11-207ENST00000478596 TMEM110-MUSTN1A8MSY1 372 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 WNT9AO14904 365 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 EFSO43281 561 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 SDC4P31431 198 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 CHKAP35790 457 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 SCNN1AP37088 669 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 RPL34P49207 117 aaKnown RBP14.88□□□□□ -0.03
USP11-207ENST00000478596 SULT1E1P49888 294 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 YWHAZP63104 245 aaKnown RBP14.88□□□□□ -0.03
USP11-207ENST00000478596 KIF5AQ12840 1032 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 PTP4A2Q12974 167 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 DCAF6Q58WW2 860 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 BSPRYQ5W0U4 402 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 RHOT2Q8IXI1 618 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 SCML4Q8N228 414 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 ZNF564Q8TBZ8 553 aaPredicted RBP14.88□□□□□ -0.03
USP11-207ENST00000478596 GRAMD1AQ96CP6 724 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 ARHGEF26Q96DR7 871 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 SLC2A11Q9BYW1 496 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 TSGA10Q9BZW7 698 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 ABCC13Q9NSE7 274 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 ASNSD1Q9NWL6 643 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP11-207ENST00000478596 ANAPC7Q9UJX3 599 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 INTUQ9ULD6 942 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 ATXN7L1Q9ULK2 861 aaPredicted RBP14.88□□□□□ -0.03
USP11-207ENST00000478596 ZNF510Q9Y2H8 683 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 PCDHGA8Q9Y5G5 932 aa14.88□□□□□ -0.03
USP11-207ENST00000478596 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.88□□□□□ -0.03
USP11-207ENST00000478596 ARID1BQ8NFD5 2236 aaPredicted RBP14.88□□□□□ -0.03
USP11-207ENST00000478596 CDRT15L2A8MXV6 281 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 GABBR2O75899 941 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 LCA5LO95447 670 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 GP1BAP07359 652 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 GLI1P08151 1106 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 GPD1P21695 349 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 PSMA2P25787 234 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 SSR1P43307 286 aaKnown RBP14.87□□□□□ -0.03
USP11-207ENST00000478596 GSCP56915 257 aaPredicted RBP14.87□□□□□ -0.03
USP11-207ENST00000478596 DAB2P98082 770 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 EFEMP1Q12805 493 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 TAF5Q15542 800 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 CDO1Q16878 200 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 SLC45A4Q5BKX6 768 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 PM20D1Q6GTS8 502 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 NCEH1Q6PIU2 408 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 DEFB106AQ8N104 65 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 FAM26EQ8N5C1 309 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 EMC1Q8N766 993 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 EXTL1Q92935 676 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 RNF34Q969K3 372 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 NMUR1Q9HB89 426 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 PRSS16Q9NQE7 514 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 UVRAGQ9P2Y5 699 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 NUDT5Q9UKK9 219 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 TPX2Q9ULW0 747 aaKnown RBP14.87□□□□□ -0.03
USP11-207ENST00000478596 CLEC4EQ9ULY5 219 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 NENFQ9UMX5 172 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 SCML1Q9UN30 329 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 SATB2Q9UPW6 733 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 NCKAP1Q9Y2A7 1128 aa14.87□□□□□ -0.03
USP11-207ENST00000478596 A0A1W2PNU3 283 aaPredicted RBP14.86□□□□□ -0.03
USP11-207ENST00000478596 MACROD2A1Z1Q3 448 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 FAM47DPA6NHR8 397 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 CCP110O43303 1012 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 ZSCAN12O43309 604 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 KRT86O43790 486 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 STC2O76061 302 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 CYP1A2P05177 515 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 FAM87AP0C7U9 286 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 CKMT1AP12532 417 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 PDGFRAP16234 1089 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 MLLT3P42568 568 aaPredicted RBP14.86□□□□□ -0.03
USP11-207ENST00000478596 CCR5P51681 352 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 ATP11AP98196 1134 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 MAMLD1Q13495 774 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 ISXQ2M1V0 245 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 ZNF776Q68DI1 518 aaPredicted RBP14.86□□□□□ -0.03
USP11-207ENST00000478596 SND1Q7KZF4 910 aaKnown RBP eCLIP14.86□□□□□ -0.03
USP11-207ENST00000478596 SCD5Q86SK9 330 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 CLEC14AQ86T13 490 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 SPATS2Q86XZ4 545 aaKnown RBP14.86□□□□□ -0.03
USP11-207ENST00000478596 OR2T34Q8NGX1 318 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 JOSD2Q8TAC2 188 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 SGF29Q96ES7 293 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 PRR11Q96HE9 360 aaPredicted RBP14.86□□□□□ -0.03
USP11-207ENST00000478596 PABPC3Q9H361 631 aaKnown RBP14.86□□□□□ -0.03
USP11-207ENST00000478596 LZTFL1Q9NQ48 299 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 CLIC5Q9NZA1 410 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 TFR2Q9UP52 801 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 PLA2G4CQ9UP65 541 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 NAALADL1Q9UQQ1 740 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 ADGRG1Q9Y653 693 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 PLXNA2O75051 1894 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 FBN2P35556 2912 aa14.86□□□□□ -0.03
USP11-207ENST00000478596 TP53BP1Q12888 1972 aaPredicted RBP14.85□□□□□ -0.03
USP11-207ENST00000478596 ITPR2Q14571 2701 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 A0A1B0GVM2 712 aa14.85□□□□□ -0.03
USP11-207ENST00000478596 LRRC72A6NJI9 287 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms