RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 HVCN1Q96D96 273 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 NLRP4Q96MN2 994 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 PPP1R10Q96QC0 940 aaKnown RBP4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 HERC2P3Q9BVR0 1158 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 AGXT2Q9BYV1 514 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 NUAK2Q9H093 628 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 RMI1Q9H9A7 625 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 PDE11AQ9HCR9 933 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 SLC22A11Q9NSA0 550 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZBTB40Q9NUA8 1239 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBX20Q9UMR3 447 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 PROCRQ9UNN8 238 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 KNDC1Q76NI1 1749 aa4.43□□□□□ -1.7
CDC42BPA-212ENST00000478573 KANK1Q14678 1352 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 TRPM2O94759 1503 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 TTC34A8MYJ7 566 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 GRM8O00222 908 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 KLK10O43240 276 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 KAT7O95251 611 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 SYF2O95926 243 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 CD4P01730 458 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 CD63P08962 238 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 T-ENOLP0DO92 83 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 NDUFS1P28331 727 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 NOS1P29475 1434 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 SLC8A1P32418 973 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 KRT9P35527 623 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 AGTR2P50052 363 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 CNGA3Q16281 694 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 BAK1Q16611 211 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 LRRC24Q50LG9 513 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 LIPMQ5VYY2 423 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 ANKRD44Q8N8A2 993 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 ENDOVQ8N8Q3 282 aaKnown RBP4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 ADPRHL1Q8NDY3 354 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 SPATA3Q8NHX4 192 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 MPLKIPQ8TAP9 179 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 ST8SIA4Q92187 359 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 MASTLQ96GX5 879 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 HTATIP2Q9BUP3 242 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 TMEM45AQ9NWC5 275 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 ANKRD50Q9ULJ7 1429 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 VPS4AQ9UN37 437 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 GDAQ9Y2T3 454 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 SIRT4Q9Y6E7 314 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 CLTCL1P53675 1640 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 ITIH6Q6UXX5 1313 aa4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 TRIP12Q14669 1992 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-212ENST00000478573 XRN1Q8IZH2 1706 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 IGLV5-39A0A0G2JS06 123 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 PRYO14603 147 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 SMAD6O43541 496 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 HNRNPA1P09651 372 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 IFIT1P09914 478 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 PEPDP12955 493 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 HOXD12P35452 270 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 STAT6P42226 847 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 CASP2P42575 452 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 CDK18Q07002 472 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 LMOD3Q0VAK6 560 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 TBL3Q12788 808 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 GAB1Q13480 694 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 MANEAQ5SRI9 462 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 FAAH2Q6GMR7 532 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 CLEC4GQ6UXB4 293 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 KIAA1324Q6UXG2 1013 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 SYNE3Q6ZMZ3 975 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 C1orf122Q6ZSJ8 110 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 LRRC8DQ7L1W4 858 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 ADGRF3Q8IZF5 1079 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 RFFLQ8WZ73 363 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 SLC25A28Q96A46 364 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 RRP36Q96EU6 259 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 P2RY11Q96G91 374 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 RBM17Q96I25 401 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 ZNF845Q96IR2 970 aaPredicted RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 PREBQ9HCU5 417 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 CD207Q9UJ71 328 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 B3GNT3Q9Y2A9 372 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 LAMC1P11047 1609 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 ALKQ9UM73 1620 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 NRXN3Q9Y4C0 1643 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 SCAF11Q99590 1463 aaKnown RBP4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 SPATA31A5Q5VU36 1347 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 SPATA31A7Q8IWB4 1347 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 NALCNQ8IZF0 1738 aa4.41□□□□□ -1.7
CDC42BPA-212ENST00000478573 C2CD4BA6NLJ0 364 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 LACTBL1A8MY62 500 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 F5H0A9 414 aaPredicted RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 RRHO14718 337 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 DHX16O60231 1041 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 BAIAP3O94812 1187 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 METTL18O95568 372 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 PLAUP00749 431 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 SLC3A2P08195 630 aaKnown RBP4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 ATP1A3P13637 1013 aa4.4□□□□□ -1.71
CDC42BPA-212ENST00000478573 CPA1P15085 419 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms