RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 OR6J1Q8NGC5 347 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 OR6B3Q8NGW1 331 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GSDMBQ8TAX9 411 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 RAET1EQ8TD07 263 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 AGAP11Q8TF27 550 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ANAPC16Q96DE5 110 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 RSRC1Q96IZ7 334 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PIWIL1Q96J94 861 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 RHOVQ96L33 236 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 HSFY1Q96LI6 401 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 FAM111AQ96PZ2 611 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 MYCBPQ99417 103 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 FERMT1Q9BQL6 677 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 C11orf84Q9BUA3 381 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 ADAMTS10Q9H324 1103 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 DHX35Q9H5Z1 703 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 TLE6Q9H808 572 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 EIF2B3Q9NR50 452 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GPATCH2LQ9NWQ4 482 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SLC5A4Q9NY91 659 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SNTG2Q9NY99 539 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 UBP1Q9NZI7 540 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SLC17A7Q9P2U7 560 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 GPN3Q9UHW5 284 aaPredicted RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 STK38LQ9Y2H1 464 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 C15orf41Q9Y2V0 281 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PCDHA11Q9Y5I1 949 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 HEY1Q9Y5J3 304 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 MRPL42Q9Y6G3 142 aaKnown RBP5.07□□□□□ -1.6
SF3B6-202ENST00000478050 DOCK3Q8IZD9 2030 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 PRUNE2Q8WUY3 3088 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 EPG5Q9HCE0 2579 aa5.07□□□□□ -1.6
SF3B6-202ENST00000478050 SF3B1O75533 1304 aaKnown RBP eCLIP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 NRCAMQ92823 1304 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 PTPRDP23468 1912 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 MIA3Q5JRA6 1907 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 WDR91A4D1P6 747 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 FAM86C2PA6NEL3 165 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SLC15A5A6NIM6 579 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 PIRO00625 290 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 PPEF2O14830 753 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 HGSO14964 777 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 XPO1O14980 1071 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 BIRC5O15392 142 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 NUAK1O60285 661 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CCDC22O60826 627 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 DAB1O75553 588 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 DGKIO75912 1065 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 RECQL4O94761 1208 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ANP32DO95626 131 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SNAI1O95863 264 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 APRTP07741 180 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 T-ENOLP0DO92 83 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 FGFR1P11362 822 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 DARSP14868 501 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 KCNE1P15382 129 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 HOXA5P20719 270 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 BGNP21810 368 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 WARSP23381 471 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 HOXA11P31270 313 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ELF1P32519 619 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TAF6P49848 677 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CCNG1P51959 295 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SLC8A3P57103 927 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ZBTB16Q05516 673 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 GRB14Q14449 540 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 KRT72Q14CN4 511 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CA9Q16790 459 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 AAK1Q2M2I8 961 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 RAB6CQ53S08 254 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TAF1BQ53T94 588 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 XKR4Q5GH76 650 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 PPP6R3Q5H9R7 873 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 FBXO47Q5MNV8 452 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 MARCH8Q5T0T0 291 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 STXBP5Q5T5C0 1151 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 STEAP4Q687X5 459 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 HEATR6Q6AI08 1181 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TLDC1Q6P9B6 456 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ALKAL1Q6UXT8 129 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 UNC5AQ6ZN44 842 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TIFABQ6ZNK6 161 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CYS1Q717R9 158 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 MARK2Q7KZI7 788 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CLNKQ7Z7G1 428 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ANKRD23Q86SG2 305 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 LONP2Q86WA8 852 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 PHC3Q8NDX5 983 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 RFWD2Q8NHY2 731 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 CCDC110Q8TBZ0 833 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 ACMSDQ8TDX5 336 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TFB1MQ8WVM0 346 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TTC17Q96AE7 1141 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SKA1Q96BD8 255 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 SLC7A6OSQ96CW6 309 aaPredicted RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 TBC1D31Q96DN5 1066 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 STAMBPL1Q96FJ0 436 aa5.06□□□□□ -1.6
SF3B6-202ENST00000478050 THOC1Q96FV9 657 aaKnown RBP5.06□□□□□ -1.6
SF3B6-202ENST00000478050 NSL1Q96IY1 281 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms