RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TRAV19A0A0A6YYK7 116 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 GOLGA8IPA6NC78 632 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 TMEM8BA6NDV4 472 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 GOLGA8JA6NMD2 632 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 LEFTY2O00292 366 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 LAD1O00515 517 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 GJB3O75712 270 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 KLF8O95600 359 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 CNOT4O95628 575 aaKnown RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 OLFM2O95897 454 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 HDCP19113 662 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 BDNFP23560 247 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 PAX3P23760 479 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 IFNAR2P48551 515 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 PGFP49763 221 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 PSMC1P62191 440 aaKnown RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 TSPY1Q01534 308 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 HHEXQ03014 270 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 ARID5AQ03989 594 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 SMARCB1Q12824 385 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 PTPAQ15257 358 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 DHCR24Q15392 516 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 TAF12Q16514 161 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 KYAT1Q16773 422 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 CFAP221Q4G0U5 840 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 LMBRD2Q68DH5 695 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 CC2D1AQ6P1N0 951 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 C19orf48Q6RUI8 117 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 ZNF720Q7Z2F6 126 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 GPR155Q7Z3F1 870 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 FILIP1Q7Z7B0 1213 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 TAX1BP1Q86VP1 789 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 METTL23Q86XA0 190 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 SFR1Q86XK3 245 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 PROSER1Q86XN7 944 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 MARCH9Q86YJ5 346 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 SLC41A1Q8IVJ1 513 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 BRSK2Q8IWQ3 736 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 CD302Q8IX05 232 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 DCP1BQ8IZD4 617 aaKnown RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 THEM5Q8N1Q8 247 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 STPG3Q8N7X2 389 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 OR5B17Q8NGF7 314 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.87□□□□□ -1.635e-12■□□□□ 8.1
CKS1B-207ENST00000477676 NEU4Q8WWR8 484 aaPredicted RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 RAD54LQ92698 747 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 ATP2A3Q93084 1043 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 DNAJC19Q96DA6 116 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 ERLEC1Q96DZ1 483 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 SAAL1Q96ER3 474 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 KCNJ15Q99712 375 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 ACBD6Q9BR61 282 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 AARSD1Q9BTE6 412 aaKnown RBP4.87□□□□□ -1.63
CKS1B-207ENST00000477676 RAB34Q9BZG1 259 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 ST6GALNAC4Q9H4F1 302 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 PDE11AQ9HCR9 933 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 GDAP2Q9NXN4 497 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 KCND2Q9NZV8 630 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 AGAP1Q9UPQ3 857 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 NEUROG3Q9Y4Z2 214 aa4.87□□□□□ -1.63
CKS1B-207ENST00000477676 RELNP78509 3460 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 A0A087X0B3 334 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 A0A1W2PQF6 199 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 ZNF840PA6NDX5 716 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 MYMKA6NI61 221 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 B2RBV5 119 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 GSTA4O15217 222 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 KAT7O95251 611 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 GJB6O95452 261 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 OAS1P00973 400 aaKnown RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 PDGFRBP09619 1106 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 GABRG2P18507 467 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 LMO1P25800 156 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 CSF2RBP32927 897 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 HOXD13P35453 343 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 RPS19P39019 145 aaKnown RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 MAGEA11P43364 429 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 GPR85P60893 370 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SIM1P81133 766 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SLC7A9P82251 487 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 MRPS21P82921 87 aaKnown RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 HMGN5P82970 282 aaKnown RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 TFAMQ00059 246 aaKnown RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 KDSRQ06136 332 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SCAPQ12770 1279 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 IFRD2Q12894 506 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 NFE2Q16621 373 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 AGBL4Q5VU57 503 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 CD276Q5ZPR3 534 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 ARL6IP4Q66PJ3 421 aaKnown RBP4.86□□□□□ -1.63
CKS1B-207ENST00000477676 DPY19L2P1Q6NXN4 242 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 POLNQ7Z5Q5 900 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 TTC30AQ86WT1 665 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SYT12Q8IV01 421 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 SCN4BQ8IWT1 228 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 ADGRF2Q8IZF7 708 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 CSGALNACT2Q8N6G5 542 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 FAM184AQ8NB25 1140 aa4.86□□□□□ -1.63
CKS1B-207ENST00000477676 HMGB4Q8WW32 186 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms