RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ARHGEF35A5YM69 484 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ANKRD62A6NC57 917 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FAM86C2PA6NEL3 165 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 LRRIQ4A6NIV6 560 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CAPN14A8MX76 684 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FAM25AB3EWG3 89 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FAM25CB3EWG5 89 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FAM25GB3EWG6 89 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SNAP23O00161 211 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 VWA5AO00534 786 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 BET1O15155 118 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 MAGEB3O15480 346 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GPAA1O43292 621 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SCO2O43819 266 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TYROBPO43914 113 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TLR2O60603 784 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FZD7O75084 574 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GCATO75600 419 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TSPAN9O75954 239 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 OR6B1O95007 311 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 PGM3O95394 542 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ZBTB11O95625 1053 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CRYZL1O95825 349 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 AMHP03971 560 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 S100BP04271 92 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 KRT18P05783 430 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ENO2P09104 434 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 PCNAP12004 261 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 COL6A2P12110 1019 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ITGA4P13612 1032 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CCDC130P13994 396 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 IL1R1P14778 569 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 IFNGR1P15260 489 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CTRB1P17538 263 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 POLR2CP19387 275 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FGFR4P22455 802 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CA4P22748 312 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 NMT1P30419 496 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ADORA1P30542 326 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ADSLP30566 484 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ATICP31939 592 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 L1CAMP32004 1257 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 HOXD13P35453 343 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GNL1P36915 607 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 STAT1P42224 750 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 PHKA1P46020 1223 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SLCO1A2P46721 670 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GYG1P46976 350 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ALDH1A3P47895 512 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ENTPD1P49961 510 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CCR3P51677 355 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CASP5P51878 434 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 BLVRAP53004 296 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TMBIM6P55061 237 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 RNASE9P60153 205 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FKBP1AP62942 108 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ASIC1P78348 528 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ECT2LQ008S8 904 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 RAD51Q06609 339 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 NIPAL4Q0D2K0 466 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CDC20Q12834 499 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 KLF10Q13118 480 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 OXA1LQ15070 435 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 MAPRE2Q15555 327 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TRIP13Q15645 432 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 NFE2Q16621 373 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 LONRF1Q17RB8 773 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 KLHL38Q2WGJ6 581 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 LSM12Q3MHD2 195 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SFT2D3Q587I9 215 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 NAALADL2Q58DX5 795 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 PPP6R3Q5H9R7 873 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FAM209AQ5JX71 171 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 RBM20Q5T481 1227 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 STRIP1Q5VSL9 837 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CTRB2Q6GPI1 263 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 PGM2L1Q6PCE3 622 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SYCE2Q6PIF2 218 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GLB1LQ6UWU2 654 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 CCDC81Q6ZN84 652 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GK5Q6ZS86 529 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 MFSD6Q6ZSS7 791 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 FAM47EQ6ZV65 393 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 HDDC2Q7Z4H3 204 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 IRF2BP2Q7Z5L9 587 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GPR180Q86V85 440 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 KBTBD6Q86V97 674 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 LACC1Q8IV20 430 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 TRIM59Q8IWR1 403 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 ZC3H3Q8IXZ2 948 aaKnown RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 LGI4Q8N135 537 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 PQLC1Q8N2U9 271 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 LSMEM1Q8N8F7 131 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 SIMC1Q8NDZ2 872 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 GABPB2Q8TAK5 448 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 STON2Q8WXE9 905 aa4.81□□□□□ -1.64
PTCD3-212ENST00000477520 KISS1RQ969F8 398 aaPredicted RBP4.81□□□□□ -1.64
PTCD3-212ENST00000477520 NRBF2Q96F24 287 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms