RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 FAM84BQ96KN1 310 aaPredicted RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 ADAD1Q96M93 576 aaKnown RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 TP63Q9H3D4 680 aaPredicted RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 TASP1Q9H6P5 420 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 TXLNGQ9NUQ3 528 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 RAB21Q9UL25 225 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 UBE2J1Q9Y385 318 aaPredicted RBP4.49□□□□□ -1.69
UBR3-209ENST00000477461 DAAM1Q9Y4D1 1078 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 NFAT5O94916 1531 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 KIAA0232Q92628 1395 aa4.49□□□□□ -1.69
UBR3-209ENST00000477461 COL14A1Q05707 1796 aaKnown RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 RGPD5Q99666 1765 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 EME2A4GXA9 379 aaPredicted RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 INAFM1C9JVW0 142 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 ACOT8O14734 319 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 SKAP2O75563 359 aaPredicted RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 HOXC9P31274 260 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 RFX2P48378 723 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 RFX5P48382 616 aaPredicted RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 POLE2P56282 527 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 DSCR9P59020 149 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 ICA1Q05084 483 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 FOXO1Q12778 655 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 TRAF1Q13077 416 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 KEAP1Q14145 624 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 GALNT3Q14435 633 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 SPARCL1Q14515 664 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 GRM4Q14833 912 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 ZACNQ401N2 412 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 ARL13AQ5H913 290 aaPredicted RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 NADSYN1Q6IA69 706 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 ADGRF3Q8IZF5 1079 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 FAM9BQ8IZU0 186 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 PAQR4Q8N4S7 273 aaPredicted RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 PRR26Q8N8Z3 221 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 ELP5Q8TE02 316 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 MUL1Q969V5 352 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 CRB3Q9BUF7 120 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 POLDIP3Q9BY77 421 aaKnown RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 PNNQ9H307 717 aaKnown RBP4.48□□□□□ -1.69
UBR3-209ENST00000477461 SFXN1Q9H9B4 322 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 IL21RQ9HBE5 538 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 KCNK9Q9NPC2 374 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 PLK2Q9NYY3 685 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 IGSF9Q9P2J2 1179 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 NFU1Q9UMS0 254 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 SLC12A4Q9UP95 1085 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 TNFSF13BQ9Y275 285 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 CPDO75976 1380 aa4.48□□□□□ -1.69
UBR3-209ENST00000477461 BLMP54132 1417 aaPredicted RBP4.47□□□□□ -1.69
UBR3-209ENST00000477461 ABCC6O95255 1503 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 PEAK1Q9H792 1746 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 SYT5O00445 386 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 PCDH17O14917 1159 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 MSI1O43347 362 aaKnown RBP4.47□□□□□ -1.69
UBR3-209ENST00000477461 NEURL1O76050 574 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 LDHAP00338 332 aaKnown RBP4.47□□□□□ -1.69
UBR3-209ENST00000477461 ANXA6P08133 673 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 RRP1P56182 461 aaKnown RBP4.47□□□□□ -1.69
UBR3-209ENST00000477461 GPR18Q14330 331 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 PUM3Q15397 648 aaKnown RBP4.47□□□□□ -1.69
UBR3-209ENST00000477461 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 CCDC184Q52MB2 194 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 Q5PR19 223 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 C10orf76Q5T2E6 689 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 GATAD2AQ86YP4 633 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 NRSN1Q8IZ57 195 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 EXD3Q8N9H8 876 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 CLMNQ96JQ2 1002 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 FAR2Q96K12 515 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 SEZ6LQ9BYH1 1024 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 PLAC1Q9HBJ0 212 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 NCKIPSDQ9NZQ3 722 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 SELENONQ9NZV5 590 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 MAGED2Q9UNF1 606 aaPredicted RBP4.47□□□□□ -1.69
UBR3-209ENST00000477461 INSRP06213 1382 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 PLCH1Q4KWH8 1693 aa4.47□□□□□ -1.69
UBR3-209ENST00000477461 FAM208AQ9UK61 1670 aaKnown RBP4.47□□□□□ -1.69
UBR3-209ENST00000477461 RGPD2P0DJD1 1756 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 COL18A1P39060 1754 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 OR6C75A6NL08 312 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 NKX2-8O15522 239 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 PEX14O75381 377 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 HOXC6P09630 235 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 PDIA3P30101 505 aaKnown RBP4.46□□□□□ -1.7
UBR3-209ENST00000477461 SERPINF1P36955 418 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 PDLIM4P50479 330 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 CDK7P50613 346 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 PMS2P54278 862 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 TMPRSS3P57727 454 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 GALNT1Q10472 559 aaPredicted RBP4.46□□□□□ -1.7
UBR3-209ENST00000477461 GPS2Q13227 327 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 EIF4A2Q14240 407 aaKnown RBP4.46□□□□□ -1.7
UBR3-209ENST00000477461 PFKFB4Q16877 469 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 AAK1Q2M2I8 961 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 KRTAP27-1Q3LI81 207 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 TOM1L2Q6ZVM7 507 aa4.46□□□□□ -1.7
UBR3-209ENST00000477461 IPO4Q8TEX9 1081 aaKnown RBP4.46□□□□□ -1.7
UBR3-209ENST00000477461 DNASE2BQ8WZ79 361 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms