RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZPBPQ9BS86 351 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 NTPCRQ9BSD7 190 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 KIFC3Q9BVG8 833 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 DUSP23Q9BVJ7 150 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 NUP85Q9BW27 656 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PLVAPQ9BX97 442 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PACSIN1Q9BY11 444 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ACPTQ9BZG2 426 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 HAPLN2Q9GZV7 340 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 C11orf54Q9H0W9 315 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ISCUQ9H1K1 167 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 SEMA6CQ9H3T2 930 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CCDC134Q9H6E4 229 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 MMRN2Q9H8L6 949 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RRAGCQ9HB90 399 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 GPR35Q9HC97 309 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CD93Q9NPY3 652 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 DDX18Q9NVP1 670 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 POLR3BQ9NW08 1133 aaPredicted RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ERVK13-1Q9NX77 482 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CYP39A1Q9NYL5 469 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 TMOD2Q9NZR1 351 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 LRIT1Q9P2V4 623 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 FETUBQ9UGM5 382 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 GRID1Q9ULK0 1009 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 ANGEL1Q9UNK9 670 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 USP22Q9UPT9 525 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 PTRH2Q9Y3E5 179 aaKnown RBP2.98□□□□□ -1.93
HMGN4-202ENST00000477243 RWDD3Q9Y3V2 267 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 CLCA3PQ9Y6N3 262 aa2.98□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQJ5 194 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 A0A1W2PQM1 296 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TCRBV5S2A0A599 114 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TMEM82A0PJX8 343 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PRSS29PA6NIE9 313 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 LACTBL1A8MY62 500 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 A8MZ25 164 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 KIF28PB7ZC32 967 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CCDC188H7C350 402 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 NRP1O14786 923 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 RRP9O43818 475 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GAS2O43903 313 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GMFGO60234 142 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 AVILO75366 819 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SLC43A1O75387 559 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 RPP40O75818 363 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 DNAJB5O75953 348 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CER1O95813 267 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ALBP02768 609 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ADRB1P08588 477 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 FAM86B2P0C5J1 330 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TSPY4P0CV99 314 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TSPY10P0CW01 314 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 HSPA5P11021 654 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ACTN1P12814 892 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ALADP13716 330 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CHN1P15882 459 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PDGFRAP16234 1089 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CD9P21926 228 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 AVPR2P30518 371 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ICAM3P32942 547 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GUCY1A2P33402 732 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SOX6P35712 828 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CCR3P51677 355 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 EPHB3P54753 998 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 VCPP55072 806 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 YWHAZP63104 245 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GBE1Q04446 702 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GRIN1Q05586 938 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 IKQ13123 557 aaPredicted RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SP140Q13342 867 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 TDGQ13569 410 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CUL2Q13617 745 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 THOC5Q13769 683 aaKnown RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 COL9A3Q14050 684 aaPredicted RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 DPYSQ14117 519 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF273Q14593 569 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ZNF750Q32MQ0 723 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ZSCAN23Q3MJ62 389 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SLC39A12Q504Y0 691 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PLA1AQ53H76 456 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 FBLN7Q53RD9 439 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 HS1BP3Q53T59 392 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 PRRT3Q5FWE3 981 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 KCNT1Q5JUK3 1230 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 RNFT1Q5M7Z0 435 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SPATA46Q5T0L3 261 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 MANEALQ5VSG8 457 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 GKAP1Q5VSY0 366 aaPredicted RBP2.97□□□□□ -1.93
HMGN4-202ENST00000477243 DAB2IPQ5VWQ8 1189 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 FAM160B1Q5W0V3 765 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 ABLIM2Q6H8Q1 611 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CENPPQ6IPU0 288 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SLC25A24Q6NUK1 477 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 NEK5Q6P3R8 708 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 MFSD7Q6UXD7 560 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 CEP128Q6ZU80 1094 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SV2AQ7L0J3 742 aa2.97□□□□□ -1.93
HMGN4-202ENST00000477243 SPATA21Q7Z572 469 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms