RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 NUP62CLQ9H1M0 184 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 OSBPL2Q9H1P3 480 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 ZDHHC6Q9H6R6 413 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 FAM207AQ9NSI2 230 aaPredicted RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 NOCTQ9UK39 431 aaKnown RBP11.9□□□□□ -0.5
VARS2-208ENST00000477052 DOCK4Q8N1I0 1966 aa11.9□□□□□ -0.5
VARS2-208ENST00000477052 ASXL3Q9C0F0 2248 aa11.9□□□□□ -0.51
VARS2-208ENST00000477052 FASNP49327 2511 aaKnown RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 ILVBLA1L0T0 632 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 POM121BA6NF01 834 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 LSM8O95777 96 aaKnown RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 GIMD1P0DJR0 217 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 HNRNPA2B1P22626 353 aaKnown RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 ERCC5P28715 1186 aaPredicted RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 AKT2P31751 481 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 SERPINH1P50454 418 aaKnown RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 POLR2FP61218 127 aaKnown RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 DAB2P98082 770 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 FMO1Q01740 532 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 MTA1Q13330 715 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 CCDC14Q49A88 953 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 TMEM259Q4ZIN3 620 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 CARD16Q5EG05 197 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 TPRG1LQ5T0D9 272 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 ATXN7L2Q5T6C5 722 aaPredicted RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 PYROXD2Q8N2H3 581 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 CCDC185Q8N715 623 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 NXPE2Q96DL1 559 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 BMFQ96LC9 184 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 HAPLN3Q96S86 360 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 PCDHB18PQ96TA0 734 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 HDAC8Q9BY41 377 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 KLHL11Q9NVR0 708 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 DNAJC28Q9NX36 388 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
VARS2-208ENST00000477052 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 RAI2Q9Y5P3 530 aa11.89□□□□□ -0.51
VARS2-208ENST00000477052 A0A087WV48 116 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 IGLON5A6NGN9 336 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 CASC3O15234 703 aaKnown RBP11.88□□□□□ -0.51
VARS2-208ENST00000477052 BRINP1O60477 761 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 MAGEC1O60732 1142 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 PIAS2O75928 621 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 PRB1P04280 392 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 C1SP09871 688 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 ADRB3P13945 408 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 ITIH2P19823 946 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 ADRA1BP35368 520 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 NUDT1P36639 197 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 SCNN1AP37088 669 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 ABL2P42684 1182 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 CLCN6P51797 869 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 NEK3P51956 506 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 OVGP1Q12889 678 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 ZNF211Q13398 564 aaPredicted RBP11.88□□□□□ -0.51
VARS2-208ENST00000477052 KRT31Q15323 416 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 RETSATQ6NUM9 610 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 OR4C6Q8NH72 309 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 VOPP1Q96AW1 172 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 HEPHQ9BQS7 1158 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 SLC17A9Q9BYT1 436 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 KLC2Q9H0B6 622 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 SCUBE2Q9NQ36 999 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 HECAQ9UBI9 543 aaPredicted RBP11.88□□□□□ -0.51
VARS2-208ENST00000477052 OR12D3Q9UGF7 316 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 KLF15Q9UIH9 416 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 NEU3Q9UQ49 428 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 PAXBP1Q9Y5B6 917 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 FADS3Q9Y5Q0 445 aa11.88□□□□□ -0.51
VARS2-208ENST00000477052 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
VARS2-208ENST00000477052 TRPM6Q9BX84 2022 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 LY6G6EA0A0G2JKS1 128 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 C16orf96A6NNT2 1141 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 KRIT1O00522 736 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 SPINT1O43278 529 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 MT-CO3P00414 261 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 CYP1A1P04798 512 aaPredicted RBP11.87□□□□□ -0.51
VARS2-208ENST00000477052 MMP8P22894 467 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 ACP1P24666 158 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 ITGB7P26010 798 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 L1CAMP32004 1257 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 ABCG1P45844 678 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 CDR2Q01850 454 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 FZD2Q14332 565 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 ACAP1Q15027 740 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 MANEALQ5VSG8 457 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 NEK5Q6P3R8 708 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 ABI3BPQ7Z7G0 1075 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 NLRP14Q86W24 1093 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 PCDH20Q8N6Y1 951 aaKnown RBP11.87□□□□□ -0.51
VARS2-208ENST00000477052 ARHGEF2Q92974 986 aaKnown RBP11.87□□□□□ -0.51
VARS2-208ENST00000477052 NAF1Q96HR8 494 aaKnown RBP11.87□□□□□ -0.51
VARS2-208ENST00000477052 PPP1R16AQ96I34 528 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 APOLD1Q96LR9 279 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 FANCLQ9NW38 375 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 CLCA2Q9UQC9 943 aa11.87□□□□□ -0.51
VARS2-208ENST00000477052 U3KQA8 63 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms