RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 SLC8A2Q9UPR5 921 aa4.87□□□□□ -1.63
SOX2-OT-207ENST00000476964 PI4KAP2A4QPH2 592 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 SAC3D1A6NKF1 404 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 GRM8O00222 908 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 MDM4O15151 490 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 DOK2O60496 412 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 CSF1P09603 554 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 CHN1P15882 459 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 CHMP24386 653 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 ARF3P61204 181 aaPredicted RBP4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 ARF1P84077 181 aaKnown RBP4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 ERV3-1Q14264 604 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 BAK1Q16611 211 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 NUGGCQ68CJ6 796 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 CCDC129Q6ZRS4 1044 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 B4GALNT4Q76KP1 1039 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 CPLX4Q7Z7G2 160 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 GPSM1Q86YR5 675 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 PELI3Q8N2H9 469 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 NLRP4Q96MN2 994 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 HDHD5Q9BXW7 423 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 TASP1Q9H6P5 420 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 MAP6D1Q9H9H5 199 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 ZNF304Q9HCX3 659 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 TMEM248Q9NWD8 314 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 FBXO4Q9UKT5 387 aa4.86□□□□□ -1.63
SOX2-OT-207ENST00000476964 TRBV5-7A0A0A0MS05 114 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 GAGE12JA6NER3 117 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 NPIPB13A6NJU9 1138 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 NPIPB5A8MRT5 1133 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 NPIPB4C9JG80 1138 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 PROB1E7EW31 1015 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 H3BNX3 289 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 MSI1O43347 362 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 ZC3H11AO75152 810 aaKnown RBP eCLIP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 KLKB1P03952 638 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 WEE2P0C1S8 567 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 PKMP14618 531 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 HOXB2P14652 356 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 PRKCHP24723 683 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 CHRNA5P30532 468 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 STAT1P42224 750 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 RAD52P43351 418 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 SETQ01105 290 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 GALNT3Q14435 633 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 MEA1Q16626 185 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 ODF3L2Q3SX64 289 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 SLC30A9Q6PML9 568 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 ATF7IPQ6VMQ6 1270 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 ZNF517Q6ZMY9 492 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 SAMD14Q8IZD0 417 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 ADAMTS15Q8TE58 950 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 INPP5DQ92835 1189 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 TREX2Q9BQ50 279 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 HERC2P3Q9BVR0 1158 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 EBF3Q9H4W6 596 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 STN1Q9H668 368 aaKnown RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 PRKRIP1Q9H875 184 aaPredicted RBP4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 Q9N2J8 555 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 HAUS2Q9NVX0 235 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 SUFUQ9UMX1 484 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 SQORQ9Y6N5 450 aa4.85□□□□□ -1.63
SOX2-OT-207ENST00000476964 TNPO2O14787 897 aaKnown RBP4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 TSPAN4O14817 238 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 TMCC2O75069 709 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 HLA-DQA2P01906 255 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 KRT20P35900 424 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 SLC16A2P36021 539 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 RASSF2P50749 326 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 OAZ1P54368 228 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 PMPCAQ10713 525 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 ALKBH1Q13686 389 aaKnown RBP4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 PKP1Q13835 747 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 PTGR1Q14914 329 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 PRTGQ2VWP7 1150 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 Q5PR19 223 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 CFAP58Q5T655 872 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 TMTC3Q6ZXV5 915 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 H1FNTQ75WM6 255 aaPredicted RBP4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 TRAPPC11Q7Z392 1133 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 ZDHHC17Q8IUH5 632 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 SLC25A41Q8N5S1 370 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 NGEFQ8N5V2 710 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 TMEM217Q8N7C4 229 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 KDM1BQ8NB78 822 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 RSRC1Q96IZ7 334 aaKnown RBP4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 PPP1R10Q96QC0 940 aaKnown RBP4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 CLPBQ9H078 707 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 SLC25A18Q9H1K4 315 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 VEZTQ9HBM0 779 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 PNRC2Q9NPJ4 139 aaKnown RBP4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 SMYD2Q9NRG4 433 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 RNF146Q9NTX7 359 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 ARL15Q9NXU5 204 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 GDAQ9Y2T3 454 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 TTLL3Q9Y4R7 772 aa4.84□□□□□ -1.63
SOX2-OT-207ENST00000476964 TCRBV7S3A2A0A539 114 aa4.83□□□□□ -1.64
SOX2-OT-207ENST00000476964 AP3D1O14617 1153 aa4.83□□□□□ -1.64
SOX2-OT-207ENST00000476964 AHCYL1O43865 530 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 6 ms