RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 ACTL9Q8TC94 416 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.65□□□□□ -0.06
CCNL1-217ENST00000476367 PRCCQ92733 491 aaPredicted RBP14.65□□□□□ -0.06
CCNL1-217ENST00000476367 SIPA1Q96FS4 1042 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 NSMCE3Q96MG7 304 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 TSGA13Q96PP4 275 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 NAPGQ99747 312 aaPredicted RBP14.65□□□□□ -0.06
CCNL1-217ENST00000476367 MAK16Q9BXY0 300 aaKnown RBP14.65□□□□□ -0.06
CCNL1-217ENST00000476367 TM6SF2Q9BZW4 377 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 C10orf88Q9H8K7 445 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 SP110Q9HB58 689 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 IPO11Q9UI26 975 aaKnown RBP14.65□□□□□ -0.06
CCNL1-217ENST00000476367 TTC7AQ9ULT0 858 aaPredicted RBP14.65□□□□□ -0.06
CCNL1-217ENST00000476367 THADAQ6YHU6 1953 aa14.65□□□□□ -0.06
CCNL1-217ENST00000476367 FRYLO94915 3013 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 TARSL2A2RTX5 802 aaKnown RBP14.64□□□□□ -0.07
CCNL1-217ENST00000476367 ZSCAN5CA6NGD5 496 aaPredicted RBP14.64□□□□□ -0.07
CCNL1-217ENST00000476367 PDE2AO00408 941 aaPredicted RBP14.64□□□□□ -0.07
CCNL1-217ENST00000476367 RPP40O75818 363 aaKnown RBP14.64□□□□□ -0.07
CCNL1-217ENST00000476367 FGGP02679 453 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 TGM2P21980 687 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 PSMD8P48556 350 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 CLCN6P51797 869 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 OTUD4Q01804 1114 aaKnown RBP14.64□□□□□ -0.07
CCNL1-217ENST00000476367 NHLH1Q02575 133 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 TFDP2Q14188 446 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 ZNF776Q68DI1 518 aaPredicted RBP14.64□□□□□ -0.07
CCNL1-217ENST00000476367 HDAC11Q96DB2 347 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 FBRSQ9HAH7 460 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 CYP8B1Q9UNU6 501 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 NUMA1Q14980 2115 aa14.64□□□□□ -0.07
CCNL1-217ENST00000476367 BPTFQ12830 3046 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 CTAGE9A4FU28 777 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 RNF103O00237 685 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 CES2O00748 559 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 MUSKO15146 869 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 CEP104O60308 925 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 LILRB5O75023 590 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 TMCC1O94876 653 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 TJP3O95049 919 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 ACADMP11310 421 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 ZFXP17010 805 aaPredicted RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 NR2C2P49116 596 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 SLC20A2Q08357 652 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PPIDQ08752 370 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 ELAVL3Q14576 367 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 IHHQ14623 411 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PRKD1Q15139 912 aaPredicted RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 KCTD19Q17RG1 926 aaPredicted RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 USP39Q53GS9 565 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PRR23BQ6ZRT6 265 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 CEP68Q76N32 757 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 MMAAQ8IVH4 418 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 ATPAF2Q8N5M1 289 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 FRMD1Q8N878 549 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 SLC35B2Q8TB61 432 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 GAB3Q8WWW8 586 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 ATG4AQ8WYN0 398 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 OR8D1Q8WZ84 308 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PBKQ96KB5 322 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 SPACA7Q96KW9 195 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 CCDC114Q96M63 670 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PHOX2BQ99453 314 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 RSPH9Q9H1X1 276 aaPredicted RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 UBA2Q9UBT2 640 aaPredicted RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 ABCA7Q8IZY2 2146 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 CXorf51AA0A1B0GTR3 108 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 HRO43593 1189 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 RNASEH1O60930 286 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 GJB3O75712 270 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 DNTTP04053 509 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 MSNP26038 577 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 RECQLP46063 649 aaPredicted RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 RPS14P62263 151 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 IL10RBQ08334 325 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 SLC10A7Q0GE19 358 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 CYTH1Q15438 398 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 LPAL2Q16609 132 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 POM121L1PQ3SYA9 428 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 SEL1L2Q5TEA6 688 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PGBD5Q8N414 524 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 RYBPQ8N488 228 aaPredicted RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PCDH20Q8N6Y1 951 aaKnown RBP14.63□□□□□ -0.07
CCNL1-217ENST00000476367 PRELID2Q8N945 189 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 OR2A12Q8NGT7 310 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 OR6K2Q8NGY2 324 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 GRIN3AQ8TCU5 1115 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 ACTRT1Q8TDG2 376 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 MAML1Q92585 1016 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 P3H4Q92791 437 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 EXOC2Q96KP1 924 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 USP29Q9HBJ7 922 aa14.63□□□□□ -0.07
CCNL1-217ENST00000476367 SDK1Q7Z5N4 2213 aa14.62□□□□□ -0.07
CCNL1-217ENST00000476367 IL1BP01584 269 aa14.62□□□□□ -0.07
CCNL1-217ENST00000476367 BCKDHBP21953 392 aa14.62□□□□□ -0.07
CCNL1-217ENST00000476367 P2RY2P41231 377 aa14.62□□□□□ -0.07
CCNL1-217ENST00000476367 NBL1P41271 181 aa14.62□□□□□ -0.07
CCNL1-217ENST00000476367 RGRP47804 291 aa14.62□□□□□ -0.07
CCNL1-217ENST00000476367 RHOAP61586 193 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms