RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 URODP06132 367 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 ATP1A3P13637 1013 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 YWHAQP27348 245 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 ABCD3P28288 659 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 TNFSF8P32971 234 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 SRSF1Q07955 248 aaKnown RBP eCLIP5.28□□□□□ -1.56
PTCD3-211ENST00000476215 PKP1Q13835 747 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 ME3Q16798 604 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 SLC4A8Q2Y0W8 1093 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 EDRF1Q3B7T1 1238 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 ZNF766Q5HY98 468 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 EPHA10Q5JZY3 1008 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 FAM69AQ5T7M9 428 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 NUGGCQ68CJ6 796 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 TRIM74Q86UV6 250 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 TRIM73Q86UV7 250 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 CHD1LQ86WJ1 897 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 MMP21Q8N119 569 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 HORMAD2Q8N7B1 307 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 TSPYL6Q8N831 410 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 NRACQ8N912 160 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 ZCCHC10Q8TBK6 192 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 ATOH1Q92858 354 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-211ENST00000476215 ZUFSPQ96AP4 578 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 NAF1Q96HR8 494 aaKnown RBP5.28□□□□□ -1.56
PTCD3-211ENST00000476215 FCRL4Q96PJ5 515 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 MPHOSPH8Q99549 860 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 AGXT2Q9BYV1 514 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 B3GNT4Q9C0J1 378 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 MAP6D1Q9H9H5 199 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 JMJD4Q9H9V9 463 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 VEZTQ9HBM0 779 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 SEMA4BQ9NPR2 832 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-211ENST00000476215 IL1RAPL1Q9NZN1 696 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 PEMTQ9UBM1 199 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 TMEM98Q9Y2Y6 226 aa5.28□□□□□ -1.56
PTCD3-211ENST00000476215 C17orf102A2RUQ5 167 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 FAM157AC9JC47 383 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 TMEM191BP0C7N4 346 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 ELF1P32519 619 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 RFC1P35251 1148 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-211ENST00000476215 KRT9P35527 623 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 ARSFP54793 590 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 ZNF667Q5HYK9 610 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 C17orf99Q6UX52 265 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 PRSS45Q7RTY3 260 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 TRAPPC11Q7Z392 1133 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 SERPINA11Q86U17 422 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 CAMK1DQ8IU85 385 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 GDPD5Q8WTR4 605 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 KIF1BPQ96EK5 621 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 PREBQ9HCU5 417 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 FZD3Q9NPG1 666 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 HCN3Q9P1Z3 774 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 TBC1D14Q9P2M4 693 aa5.27□□□□□ -1.57
PTCD3-211ENST00000476215 SLC25A10Q9UBX3 287 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-211ENST00000476215 LY6G6EA0A0G2JKS1 128 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 IGLV5-39A0A0G2JS06 123 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 ARHGAP10A1A4S6 786 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 PABPN1LA6NDY0 278 aaKnown RBP5.26□□□□□ -1.57
PTCD3-211ENST00000476215 GAGE10A6NGK3 116 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 PROB1E7EW31 1015 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 STMND1H3BQB6 276 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 SOCS2O14508 198 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 MDM4O15151 490 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 EPB41L2O43491 1005 aaKnown RBP5.26□□□□□ -1.57
PTCD3-211ENST00000476215 SLC25A17O43808 307 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 SH3BP5O60239 455 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 WDHD1O75717 1129 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-211ENST00000476215 EPN2O95208 641 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 SYF2O95926 243 aaKnown RBP5.26□□□□□ -1.57
PTCD3-211ENST00000476215 CCT4P50991 539 aaKnown RBP5.26□□□□□ -1.57
PTCD3-211ENST00000476215 EFNB1P98172 346 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 TWIST1Q15672 202 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 ACAD10Q6JQN1 1059 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 MOB3CQ70IA8 216 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 ZDHHC23Q8IYP9 409 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 TMEM199Q8N511 208 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 PLD5Q8N7P1 536 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 TEX19Q8NA77 164 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 KDM1BQ8NB78 822 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 PCYOX1LQ8NBM8 494 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 SLC25A28Q96A46 364 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 MPP4Q96JB8 637 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 ZNF333Q96JL9 665 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 NLRP4Q96MN2 994 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 POT1Q9NUX5 634 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 PPP1R14DQ9NXH3 145 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 SEL1LQ9UBV2 794 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 ZNF69Q9UC07 566 aa5.26□□□□□ -1.57
PTCD3-211ENST00000476215 ZNF521Q96K83 1311 aa5.25□□□□□ -1.57
PTCD3-211ENST00000476215 ABCC9O60706 1549 aa5.25□□□□□ -1.57
PTCD3-211ENST00000476215 A0A096LPK6 155 aa5.25□□□□□ -1.57
PTCD3-211ENST00000476215 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-211ENST00000476215 HSPB6O14558 160 aa5.25□□□□□ -1.57
PTCD3-211ENST00000476215 IFNA2P01563 188 aa5.25□□□□□ -1.57
PTCD3-211ENST00000476215 KLKB1P03952 638 aa5.25□□□□□ -1.57
PTCD3-211ENST00000476215 CD53P19397 219 aa5.25□□□□□ -1.57
PTCD3-211ENST00000476215 NR4A2P43354 598 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms