RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SSTR1P30872 391 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 IFNGR2P38484 337 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ABATP80404 500 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 BIKQ13323 160 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 QRICH1Q2TAL8 776 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 MGAT5BQ3V5L5 792 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TCHHL1Q5QJ38 904 aaPredicted RBP11.66□□□□□ -0.54
U2AF1-209ENST00000475639 PGBD2Q6P3X8 592 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CLVS1Q8IUQ0 354 aaPredicted RBP11.66□□□□□ -0.54
U2AF1-209ENST00000475639 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 AMER2Q8N7J2 671 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 BLOC1S5Q8TDH9 187 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CDH22Q9UJ99 828 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ADAMTSL3P82987 1691 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 A0A087WXM4 84 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TSPAN19P0C672 248 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF846Q147U1 533 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 C6orf52Q5T4I8 152 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TTC23Q5W5X9 447 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 NEK5Q6P3R8 708 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM26Q6ZUK4 368 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 MAGEB10Q96LZ2 347 aaPredicted RBP11.66□□□□□ -0.54
U2AF1-209ENST00000475639 DHRS4Q9BTZ2 278 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 TMEM138Q9NPI0 162 aa11.66□□□□□ -0.54
U2AF1-209ENST00000475639 CCDC162PA2VCL2 907 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 IDH3BO43837 385 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 KPNA6O60684 536 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 CSDE1O75534 798 aaKnown RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 PARNO95453 639 aaKnown RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 ETS1P14921 441 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GPD1P21695 349 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 SLC5A3P53794 718 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 AQP5P55064 265 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 CDH18Q13634 790 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 TCEAL5Q5H9L2 206 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 HLA-DQA1Q5Y7H0 255 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 STK32CQ86UX6 486 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 HPS6Q86YV9 775 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 NSUN4Q96CB9 384 aaKnown RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 CINPQ9BW66 212 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 SH3BP4Q9P0V3 963 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 KCNH4Q9UQ05 1017 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 SSTR3P32745 418 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 ETFBP38117 255 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 STARP49675 285 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 NRG3P56975 720 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 ZNF177Q13360 481 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GNA13Q14344 377 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 AGKQ53H12 422 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 ULK3Q6PHR2 472 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 SYTL1Q8IYJ3 562 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 CCDC33Q8N5R6 958 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 EPS8L1Q8TE68 723 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 RFT1Q96AA3 541 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GPATCH1Q9BRR8 931 aaKnown RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 NOCTQ9UK39 431 aaKnown RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GTF3C4Q9UKN8 822 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 SPO11Q9Y5K1 396 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 EIF3FO00303 357 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GRAP2O75791 330 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 ERVK-10P10266 1014 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 TNNI3P19429 210 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 NMT1P30419 496 aaKnown RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 HOXD11P31277 338 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 RAB15P59190 212 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 PTSQ03393 145 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 DCLRE1AQ6PJP8 1040 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 DHRSXQ8N5I4 330 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 DCAKDQ8WVC6 231 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 MNTQ99583 582 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 SEPT5Q99719 369 aaPredicted RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 EBF4Q9BQW3 602 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 MECRQ9BV79 373 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GBA3Q9H227 469 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 LRRC40Q9H9A6 602 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 GIT1Q9Y2X7 761 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 AAR2Q9Y312 384 aaKnown RBP11.65□□□□□ -0.54
U2AF1-209ENST00000475639 PCDHGA3Q9Y5H0 932 aa11.65□□□□□ -0.54
U2AF1-209ENST00000475639 TXNP10599 105 aaKnown RBP11.65□□□□□ -0.55
U2AF1-209ENST00000475639 GZMAP12544 262 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 AOC1P19801 751 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 SLC11A2P49281 568 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 ACOT2P49753 483 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 CDKL1Q00532 357 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 CAMK2BQ13554 666 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 PROSER1Q86XN7 944 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 PQLC1Q8N2U9 271 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 CENPSQ8N2Z9 138 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 KYQ8NBH2 561 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 EEF1AKMT1Q8WVE0 214 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 KAT5Q92993 513 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 HAVCR1Q96D42 359 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 CLIP3Q96DZ5 547 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 SERAC1Q96JX3 654 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 CCDC3Q9BQI4 270 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 PHF11Q9UIL8 331 aa11.65□□□□□ -0.55
U2AF1-209ENST00000475639 RBM7Q9Y580 266 aaKnown RBP11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms