RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 GDAQ9Y2T3 454 aa6.81□□□□□ -1.32
SMC5-203ENST00000475540 FAM157AC9JC47 383 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 NGFRP08138 427 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 CNPP09543 421 aaKnown RBP6.8□□□□□ -1.32
SMC5-203ENST00000475540 WEE2P0C1S8 567 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 HOXA11P31270 313 aaPredicted RBP6.8□□□□□ -1.32
SMC5-203ENST00000475540 GPR12P47775 334 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 RFX5P48382 616 aaPredicted RBP6.8□□□□□ -1.32
SMC5-203ENST00000475540 DSC1Q08554 894 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 TBC1D9BQ66K14 1250 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 TRILQ7L0X0 811 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 MIB2Q96AX9 1013 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 ATP8A2Q9NTI2 1148 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 PCDHGB3Q9Y5G1 929 aa6.8□□□□□ -1.32
SMC5-203ENST00000475540 A0A096LPK6 155 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 HOXB6P17509 224 aaKnown RBP6.79□□□□□ -1.32
SMC5-203ENST00000475540 PTPN9P43378 593 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 PMS2P54278 862 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 SLC12A1Q13621 1099 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 SLC4A8Q2Y0W8 1093 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 KIAA1161Q6NSJ0 714 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 Q6ZSV7 163 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 MEPCEQ7L2J0 689 aaKnown RBP6.79□□□□□ -1.32
SMC5-203ENST00000475540 TMEM163Q8TC26 289 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 ATOH1Q92858 354 aaPredicted RBP6.79□□□□□ -1.32
SMC5-203ENST00000475540 APOLD1Q96LR9 279 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 CXorf56Q9H5V9 222 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 IL36RNQ9UBH0 155 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 WNT16Q9UBV4 365 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 CNPY2Q9Y2B0 182 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 CLDN16Q9Y5I7 305 aa6.79□□□□□ -1.32
SMC5-203ENST00000475540 SRPRBQ9Y5M8 271 aaKnown RBP6.79□□□□□ -1.32
SMC5-203ENST00000475540 VWA3AA6NCI4 1184 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 PEX12O00623 359 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 TSPAN3O60637 253 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 SERPINC1P01008 464 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 PCYT1AP49585 367 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 Q0VFX4 171 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 UBAP2Q5T6F2 1119 aaKnown RBP6.78□□□□□ -1.32
SMC5-203ENST00000475540 MON1BQ7L1V2 547 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 ANKRD18AQ8IVF6 992 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 TEX45Q8NA69 505 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 DNAAF1Q8NEP3 725 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 HSPH1Q92598 858 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 STAMQ92783 540 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 STN1Q9H668 368 aaKnown RBP6.78□□□□□ -1.32
SMC5-203ENST00000475540 ENTPD7Q9NQZ7 604 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 HDAC6Q9UBN7 1215 aa6.78□□□□□ -1.32
SMC5-203ENST00000475540 ARID4BQ4LE39 1312 aaPredicted RBP6.77□□□□□ -1.32
SMC5-203ENST00000475540 ASAP2O43150 1006 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 KLK10O43240 276 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 GNLYP22749 145 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 CCKBRP32239 447 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 ABATP80404 500 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 ZXDBP98169 803 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 EGR4Q05215 589 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 TBL3Q12788 808 aaKnown RBP6.77□□□□□ -1.33
SMC5-203ENST00000475540 RPE65Q16518 533 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 SLC18A3Q16572 532 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 RUSC1-AS1Q66K80 236 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 NAPEPLDQ6IQ20 393 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 FAM83HQ6ZRV2 1179 aaPredicted RBP6.77□□□□□ -1.33
SMC5-203ENST00000475540 BHLHA9Q7RTU4 235 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 RBFAQ8N0V3 343 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 ADAMTS15Q8TE58 950 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 SCLT1Q96NL6 688 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 CD180Q99467 661 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 LHPPQ9H008 270 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 ZNF580Q9UK33 172 aa6.77□□□□□ -1.33
SMC5-203ENST00000475540 SH2D7A6NKC9 451 aaPredicted RBP6.76□□□□□ -1.33
SMC5-203ENST00000475540 KRTAP29-1A8MX34 341 aaPredicted RBP6.76□□□□□ -1.33
SMC5-203ENST00000475540 LDB2O43679 373 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 CLDN7O95471 211 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 LTBQ06643 244 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 CRYZQ08257 329 aaKnown RBP6.76□□□□□ -1.33
SMC5-203ENST00000475540 FBXO43Q4G163 708 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 ATG9BQ674R7 924 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.76□□□□□ -1.33
SMC5-203ENST00000475540 OR4N2Q8NGD1 307 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 RASSF8Q8NHQ8 419 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 ELP5Q8TE02 316 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 NEUROG1Q92886 237 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 TMEM18Q96B42 140 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 TWNKQ96RR1 684 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 REEP2Q9BRK0 252 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 SEZ6LQ9BYH1 1024 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 ALKBH4Q9NXW9 302 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMC5-203ENST00000475540 GPR52Q9Y2T5 361 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 RAI2Q9Y5P3 530 aa6.76□□□□□ -1.33
SMC5-203ENST00000475540 SLC28A2O43868 658 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 GLUD1P00367 558 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 ADAP00813 363 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 CHRM4P08173 479 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 ACAA1P09110 424 aaPredicted RBP6.75□□□□□ -1.33
SMC5-203ENST00000475540 HSD3B1P14060 373 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 NAGAP17050 411 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 CD72P21854 359 aa6.75□□□□□ -1.33
SMC5-203ENST00000475540 GLUD2P49448 558 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms