RNA–Protein interactions for RNA: ENST00000475076.5

DYSF-215, Transcript of dysferlin, human

TSL 2

Gene DYSF, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DYSF-215	ENST00000475076	SPA17	Q15506	151 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	CCDC14	Q49A88	953 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	RAB6C	Q53S08	254 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	PRAMEF14	Q5SWL7	426 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	NAPEPLD	Q6IQ20	393 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	ALKBH5	Q6P6C2	394 aa	Known RBP	13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	LINGO4	Q6UY18	593 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	PHLDB2	Q86SQ0	1253 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	TRIM69	Q86WT6	500 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	OR7D4	Q8NG98	312 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	OR2A12	Q8NGT7	310 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	JOSD2	Q8TAC2	188 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	ELF4	Q99607	663 aa	Predicted RBP	13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	RAB6C	Q9H0N0	254 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	ISCU	Q9H1K1	167 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	LUC7L	Q9NQ29	371 aa	Known RBP	13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	SEPT11	Q9NVA2	429 aa	Known RBP	13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	TOR4A	Q9NXH8	423 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	DMTF1	Q9Y222	760 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	IGF2R	P11717	2491 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	CEP295	Q9C0D2	2601 aa		13.57	□□□□□ -0.24
DYSF-215	ENST00000475076	TLR4	O00206	839 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	CBX4	O00257	560 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	SMAD6	O43541	496 aa	Known RBP	13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	TNFSF14	O43557	240 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	ZMPSTE24	O75844	475 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	PRNP	P04156	253 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	GLDC	P23378	1020 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	ADRA1B	P35368	520 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	GSC	P56915	257 aa	Predicted RBP	13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	IL9R	Q01113	521 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	NRG1	Q02297	640 aa	Predicted RBP	13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	SLC20A2	Q08357	652 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	CCDC15	Q0P6D6	951 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	CDO1	Q16878	200 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	INAVA	Q3KP66	663 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	ARL13B	Q3SXY8	428 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	POM121L1P	Q3SYA9	428 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	CCDC122	Q5T0U0	273 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	MANEAL	Q5VSG8	457 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	ACAD10	Q6JQN1	1059 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	RETSAT	Q6NUM9	610 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	C22orf39	Q6P5X5	142 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	STRADA	Q7RTN6	431 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	PHF13	Q86YI8	300 aa	Predicted RBP	13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	MFSD2A	Q8NA29	543 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	CENPI	Q92674	756 aa	Predicted RBP	13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	SPON2	Q9BUD6	331 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	OSBPL2	Q9H1P3	480 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	RETREG1	Q9H6L5	497 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	PREB	Q9HCU5	417 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	GDF3	Q9NR23	364 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	SPTLC3	Q9NUV7	552 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	ADAM22	Q9P0K1	906 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	OR12D3	Q9UGF7	316 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	INTU	Q9ULD6	942 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	ACACA	Q13085	2346 aa		13.56	□□□□□ -0.24
DYSF-215	ENST00000475076	COL5A1	P20908	1838 aa	Predicted RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	KPNA3	O00505	521 aa	Predicted RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	YKT6	O15498	198 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	MAGEC1	O60732	1142 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	ZNF821	O75541	412 aa	Predicted RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	GJB6	O95452	261 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	CALB1	P05937	261 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	KRT3	P12035	628 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	MAT2A	P31153	395 aa	Known RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	RECQL	P46063	649 aa	Predicted RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	NSF	P46459	744 aa	Known RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	NXPH1	P58417	271 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	TAS2R38	P59533	333 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	GNA12	Q03113	381 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	OVGP1	Q12889	678 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	SHB	Q15464	509 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	SETMAR	Q53H47	684 aa	Predicted RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	PIP5KL1	Q5T9C9	394 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	GATAD2A	Q86YP4	633 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	TXLNB	Q8N3L3	684 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	CHST14	Q8NCH0	376 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	SAP25	Q8TEE9	199 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	ARRDC3	Q96B67	414 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	VCPIP1	Q96JH7	1222 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	SELENOO	Q9BVL4	669 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	CEP44	Q9C0F1	390 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	ERVMER34-1	Q9H9K5	563 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	ATP13A1	Q9HD20	1204 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	ADGRG1	Q9Y653	693 aa		13.55	□□□□□ -0.24
DYSF-215	ENST00000475076	CXorf51A	A0A1B0GTR3	108 aa		13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	RNF103	O00237	685 aa		13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	RNGTT	O60942	597 aa	Known RBP	13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	FTL	P02792	175 aa	Predicted RBP	13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	ITGAV	P06756	1048 aa		13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	RHOQ	P17081	205 aa		13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	RFC1	P35251	1148 aa	Predicted RBP	13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	ETFB	P38117	255 aa		13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	MAGEA1	P43355	309 aa		13.54	□□□□□ -0.24
DYSF-215	ENST00000475076	RXRG	P48443	463 aa		13.54	□□□□□ -0.24

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