RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 OR52B2Q96RD2 323 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 KCNK16Q96T55 309 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CYTH2Q99418 400 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TRIM56Q9BRZ2 755 aaKnown RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 TMEM121Q9BTD3 319 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TAPBPLQ9BX59 468 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 BCO2Q9BYV7 579 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 LHPPQ9H008 270 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.17□□□□□ -1.74
USP16-205ENST00000474835 KCNN2Q9H2S1 579 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 CXorf21Q9HAI6 301 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ZFP14Q9HCL3 533 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TNFRSF12AQ9NP84 129 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 SAYSD1Q9NPB0 183 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 ANLNQ9NQW6 1124 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TMEFF2Q9UIK5 374 aaPredicted RBP4.17□□□□□ -1.74
USP16-205ENST00000474835 TLK1Q9UKI8 766 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 SLC27A5Q9Y2P5 690 aa4.17□□□□□ -1.74
USP16-205ENST00000474835 TRBV5-3A0A0A0MS03 114 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ARHGEF35A5YM69 484 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 CLDN24A6NM45 220 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TMEM229AB2RXF0 380 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SDHDO14521 159 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 DYRK3O43781 588 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PFDN1O60925 122 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 NDUFS2O75306 463 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 H2AFYO75367 372 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 LRCH4O75427 683 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ESRRBO95718 433 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 EDN1P05305 212 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ENO1P06733 434 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 HSPA8P11142 646 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 GABRB1P18505 474 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 RPL17P18621 184 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 ATP6V1B2P21281 511 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 RPL10P27635 214 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 VAMP7P51809 220 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 NME5P56597 212 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 MYL6P60660 151 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SNAP25P60880 206 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ABCE1P61221 599 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 TIAL1Q01085 375 aaKnown RBP eCLIP4.16□□□□□ -1.74
USP16-205ENST00000474835 CYP24A1Q07973 514 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SLC12A1Q13621 1099 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ACOX1Q15067 660 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 HIF1AQ16665 826 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 UBE2SQ16763 222 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.16□□□□□ -1.74
USP16-205ENST00000474835 RBM48Q5RL73 367 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 C1orf146Q5VVC0 180 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PPP2R2DQ66LE6 453 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 LLGL2Q6P1M3 1020 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 KIAA0408Q6ZU52 694 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 LARP4Q71RC2 724 aaKnown RBP eCLIP4.16□□□□□ -1.74
USP16-205ENST00000474835 BEND5Q7L4P6 421 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 RAB44Q7Z6P3 723 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 LINC00523Q86TU6 105 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TMEM135Q86UB9 458 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 HEATR4Q86WZ0 1026 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 MFSD6LQ8IWD5 586 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ZCRB1Q8TBF4 217 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 TAS1R2Q8TE23 839 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 CHTF18Q8WVB6 975 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 HDAC2Q92769 488 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 DYDC2Q96IM9 177 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 MMP19Q99542 508 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 IL12RB2Q99665 862 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 C1QTNF3Q9BXJ4 246 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 REG4Q9BYZ8 158 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ZNF518BQ9C0D4 1074 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 UNC93B1Q9H1C4 597 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 MUC13Q9H3R2 512 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SLA2Q9H6Q3 261 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SLC38A10Q9HBR0 1119 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 CACNA2D2Q9NY47 1150 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 KCMF1Q9P0J7 381 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ZBTB1Q9Y2K1 713 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PCDHGA3Q9Y5H0 932 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ZCWPW2A0A1B0GU75 182 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TEX51A0A1B0GUA7 166 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 RPS10-NUDT3A0A1W2PQS6 291 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 TLDC2A0PJX2 215 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 METTL15A6NJ78 407 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 KDM1AO60341 852 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SLITRK5O94991 958 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 APOEP02649 317 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ITGAMP11215 1152 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 SYN1P17600 705 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PRDX5P30044 214 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ETV3P41162 512 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 PSMC5P62195 406 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 MERTKQ12866 999 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ITPK1Q13572 414 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 ZNF394Q53GI3 561 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 CAPN13Q6MZZ7 669 aaPredicted RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 UGT3A1Q6NUS8 523 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 DDX53Q86TM3 631 aaKnown RBP4.16□□□□□ -1.74
USP16-205ENST00000474835 SLC22A15Q8IZD6 547 aa4.16□□□□□ -1.74
USP16-205ENST00000474835 C7orf31Q8N865 590 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms