RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 HEXIM1O94992 359 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 EIF2S1P05198 315 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ACAA1P09110 424 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CCDC192P0DO97 292 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ERVK-10P10266 1014 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 RALBP11234 206 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CYP19A1P11511 503 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 NCF1P14598 390 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TSHRP16473 764 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CKMT2P17540 419 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 GBP1P32455 592 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 PTGIRP43119 386 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 PSMC5P62195 406 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 YPEL5P62699 121 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SUMO1P63165 101 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 NPRL3Q12980 569 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 PAK1Q13153 545 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TOB2Q14106 344 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 LRRC32Q14392 662 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 POLD3Q15054 466 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 RSPO4Q2I0M5 234 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CLEC16AQ2KHT3 1053 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 KLHL38Q2WGJ6 581 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 HFEQ30201 348 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 MYLK3Q32MK0 819 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM98BQ52LJ0 330 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 MPP7Q5T2T1 576 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TTC22Q5TAA0 569 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TMC5Q6UXY8 1006 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC30A10Q6XR72 485 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 Q6ZNB5 142 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 RIOX2Q8IUF8 465 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CCNJLQ8IV13 435 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 LIX1LQ8IVB5 337 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ZFPM1Q8IX07 1006 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 MIER2Q8N344 545 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 AOPEPQ8N6M6 819 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SETD9Q8NE22 299 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 MCPH1Q8NEM0 835 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 LMBR1Q8WVP7 490 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 IFT81Q8WYA0 676 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 PPP1R14AQ96A00 147 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 GRAMD1AQ96CP6 724 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 SPDL1Q96EA4 605 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 C1GALT1C1Q96EU7 318 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 METTL2AQ96IZ6 378 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CCDC42Q96M95 316 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 FGD4Q96M96 766 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 PANX2Q96RD6 677 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 CD244Q9BZW8 370 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ANKRD2Q9GZV1 360 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 GGNBP2Q9H3C7 697 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 IL1RAPL2Q9NP60 686 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 EMC7Q9NPA0 242 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM120CQ9NX05 1096 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 GALNT8Q9NY28 637 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ATXN10Q9UBB4 475 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 TRIM10Q9UDY6 481 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 NARFQ9UHQ1 456 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ATP6V1HQ9UI12 483 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 POMT1Q9Y6A1 747 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF831Q5JPB2 1677 aa6.2□□□□□ -1.42
SMARCE1-208ENST00000474246 NUP155O75694 1391 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PTGES3LE9PB15 166 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 E9PI62 339 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 AGRPO00253 132 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MEIS2O14770 477 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 VILLO15195 856 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PLA2G6O60733 806 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 DIRAS3O95661 229 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CSTAP01040 98 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CSF1P09603 554 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ZCCHC18P0CG32 403 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 EZRP15311 586 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 HOXB8P17481 243 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SLC9A1P19634 815 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 RXRAP19793 462 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SERPINB6P35237 376 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ARL3P36405 182 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CASP3P42574 277 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MAGEA1P43355 309 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 GPR3P46089 330 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MECP2P51608 486 aaKnown RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 BMXP51813 675 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 EPHA4P54764 986 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 GAD2Q05329 585 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SLFN5Q08AF3 891 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CLN3Q13286 438 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PON2Q15165 354 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SOWAHCQ53LP3 525 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 FAM76BQ5HYJ3 339 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 MOB2Q70IA6 237 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 ZNF677Q86XU0 584 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 SCN4BQ8IWT1 228 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CNTN4Q8IWV2 1026 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 C17orf53Q8N3J3 647 aaPredicted RBP6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 CSGALNACT2Q8N6G5 542 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 PLD5Q8N7P1 536 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TTC16Q8NEE8 873 aa6.19□□□□□ -1.42
SMARCE1-208ENST00000474246 TTLQ8NG68 377 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms