RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PCED1AQ9H1Q7 454 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 ZDHHC6Q9H6R6 413 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 VPS45Q9NRW7 570 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 ETNK2Q9NVF9 386 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 ACTL7AQ9Y615 435 aa13.99□□□□□ -0.17
USF1-205ENST00000473969 MUC22E2RYF6 1773 aaPredicted RBP13.99□□□□□ -0.17
USF1-205ENST00000473969 CKAP5Q14008 2032 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 J3KR12 359 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 KRIT1O00522 736 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 PJA2O43164 708 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 ARHGAP6O43182 974 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 SLC7A4O43246 635 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 LEFTY1O75610 366 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 NEBLO76041 1014 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 CD160O95971 181 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 GNSP15586 552 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 ZFXP17010 805 aaPredicted RBP13.98□□□□□ -0.17
USF1-205ENST00000473969 MX2P20592 715 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 IL4RP24394 825 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 ACSL1P33121 698 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 MPLP40238 635 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 PTGER3P43115 390 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 RENBPP51606 427 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 MYLK3Q32MK0 819 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 POM121L1PQ3SYA9 428 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 TMCO4Q5TGY1 634 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 VSIG1Q86XK7 387 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 RFX6Q8HWS3 928 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 SYT12Q8IV01 421 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 ARHGAP12Q8IWW6 846 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 NPWQ8N729 165 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 PAF1Q8N7H5 531 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 NETO2Q8NC67 525 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 CHST14Q8NCH0 376 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 TPCN2Q8NHX9 752 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 KIAA1524Q8TCG1 905 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 RAPGEF5Q92565 580 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
USF1-205ENST00000473969 LRIG1Q96JA1 1093 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 DESI2Q9BSY9 194 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 TSGA10Q9BZW7 698 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 MIR1-1HGQ9H1L0 117 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 SEMA4GQ9NTN9 838 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 HAUS2Q9NVX0 235 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 SUSD2Q9UGT4 822 aa13.98□□□□□ -0.17
USF1-205ENST00000473969 REXO2Q9Y3B8 237 aaKnown RBP13.98□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3DA0A087WVF3 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3IA0A087WXS9 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3EA0A087X179 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3KA0A087X1G2 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 MACROD2A1Z1Q3 448 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 RCCD1A6NED2 376 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3FA6NER0 549 aaPredicted RBP13.97□□□□□ -0.17
USF1-205ENST00000473969 METTL12A8MUP2 240 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 ZNF487B1APH4 448 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3LB9A6J9 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 APOL1O14791 398 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 KHNYNO15037 678 aaKnown RBP13.97□□□□□ -0.17
USF1-205ENST00000473969 FSBPO95073 299 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 ZRANB2O95218 330 aaKnown RBP eCLIP13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3HP0C7X1 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 ITPKAP23677 461 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 HOXD12P35452 270 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 CETN2P41208 172 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 ZNF235Q14590 738 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 GRM3Q14832 879 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 CYTH1Q15438 398 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 CSRP2Q16527 193 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 CFAP58Q5T655 872 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 DCAF12L1Q5VU92 463 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3GQ6DHY5 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3CQ6IPX1 549 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TIGD7Q6NT04 549 aaPredicted RBP13.97□□□□□ -0.17
USF1-205ENST00000473969 FBXL19Q6PCT2 694 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 CCDC50Q8IVM0 306 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 LRRC8AQ8IWT6 810 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 KIAA2013Q8IYS2 634 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TBC1D3Q8IZP1 549 aaPredicted RBP13.97□□□□□ -0.17
USF1-205ENST00000473969 SYCE1Q8N0S2 351 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 AADATQ8N5Z0 425 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 OR2T34Q8NGX1 318 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 PCDH19Q8TAB3 1148 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 CEP76Q8TAP6 659 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 ZNF599Q96NL3 588 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 RNF157Q96PX1 679 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 OSBPL1AQ9BXW6 950 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 LACRTQ9GZZ8 138 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 KDM4CQ9H3R0 1056 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 SEPT3Q9UH03 358 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 SARDHQ9UL12 918 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
USF1-205ENST00000473969 MFHAS1Q9Y4C4 1052 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 DUSP10Q9Y6W6 482 aa13.97□□□□□ -0.17
USF1-205ENST00000473969 ZFHX2Q9C0A1 2572 aaPredicted RBP13.97□□□□□ -0.17
USF1-205ENST00000473969 KRT86O43790 486 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 ZNF821O75541 412 aaPredicted RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
USF1-205ENST00000473969 CTSLP07711 333 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 ZNF806P0C7X5 589 aa13.96□□□□□ -0.17
USF1-205ENST00000473969 CNTN1Q12860 1018 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms